GO241839

Overview
NameGO241839
Unique NameGO241839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 2.162e-60
Identity = 119/268 (44.40%), Postives = 162/268 (60.45%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIST--GSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQ-NTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G +KT+ EAV + P+ +  RC+IY+K G Y            + + GDG   TI T   S+ +  G+TT  S T+ V  +GF+A+ +  QNTAGP  HQAVA RV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFIFG +A V+QN  I  RK    Q+N VTA G         G  +  C ++A  +LE  + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+    T  Y E+ NRGPGA T+ RV W
Sbjct:  281 GQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPW 548          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 2.643e-58
Identity = 116/268 (43.28%), Postives = 161/268 (60.07%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIST--GSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADP-NQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G +KTV++AV + P+ +  RC+I++K G Y            + + GDG   T+ +   S+ +  G+TT  S T+ V  +GF+A+ +  +NTAGP  HQAVA+RV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFIFG +A V+QN  I  RK    Q N VTA G         G  +Q C ++    L   +  + SYLGRPWK++S TV++ S IGD I P GW  W G+   K+  Y EY NRGPGA T++RV W
Sbjct:  292 GQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW 559          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 4.508e-58
Identity = 116/268 (43.28%), Postives = 161/268 (60.07%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIST--GSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQ-NTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G +KT+ EAV + P+ +  RC+IY+K G Y            + + GDG   TI T   S+ +  G+TT  S T+ V  +GF+A+ +  QNTAGP  +QAVA RV+ D++VI  CR D YQDTLY +  RQFYR+  ++GTVDFI G +A V+QN  I  RK    Q+N VTA G+        G  +  C ++A  +LE  + +++SYLGRPWK ++ T V+ + IGD I P GW+EW G+    T  Y E+ NRGPGA  + RV W
Sbjct:  268 GQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPW 535          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.572e-37
Identity = 93/274 (33.94%), Postives = 141/274 (51.46%), Query Frame = 1
Query:    4 NYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAAR----KPMSKQSN-MVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            N+ TV+ AV +  + S+ R VI++  G Y            + + G G D+T    +      + TF  AT+ V G  F+A+++   N A     G    QAVA+R++ D+S    C     QDTL+    R +++DCYI G++DFIFGNA  + Q+C+I +      P SK  N  VTA GR+  ++N+G S   C          + G+   +LGR W+ YSR V + + + D I P GW+ ++      T++YGEY   GPGA  SKR  +
Sbjct:  100 NFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNC---------TIGGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAPY 364          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.773e-37
Identity = 97/276 (35.14%), Postives = 138/276 (50.00%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMD-LTISTGSLNVVDGST-----TFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G++  +++A+ S P  +  R VI V  G Y            + I G+G +  T+  G       S      T+ SA+ AV    F+A+++  +NT      G    QAVALRVSAD +    CR+   QDTLY H  R +Y+DCYI G+VDFIFGNA  + + C + A   ++ +   VTAQGR+   ++TG S  KC V  +  L         YLGR W  +SR V   +++ + I P GW  W       T++YG+Y   G GA    RV W
Sbjct:   94 GDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAW 357          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 87/275 (31.64%), Postives = 137/275 (49.82%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNV----------VDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G+Y +V++A+ S P  +  R VI +  G Y            +   G   ++T+ T +             V G+ TF   ++ V G+ FIA+++  +N+A     QAVA+RV+AD+     CR   +QDTLY H  +Q+ +DCYI G+VDFIFGN+  +L++C I       K    +TAQ R    ++TG    +C +  +        S   YLGRPW  + R V+  +++   I   GW  W      ++  + EY   GPG+ +S+RV W
Sbjct:   15 GDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHC-----KSQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPW 278          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.843e-33
Identity = 93/277 (33.57%), Postives = 134/277 (48.38%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGM---DLTIS---TGSLNVVDGST--TFKSATIAVGGDGFIAQDLWIQNT----AGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G+  TV+ AV   PD++  R  I++  G Y            +  +G+     D  IS     S    DG    T+++A++++  D F A  +  +NT    AG +  QAVALR+  D++V  R R+   QDTL+      ++  CYI G VDFIFGNA  + Q+C I +    +K+   + A  R    ++TG S   CD         + G+ + YLGR W  YSRTV     I D I P GWS+W      + + +GEY  RG GA    RV W
Sbjct:   90 GDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCD---------ISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPW 354          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 6.556e-33
Identity = 72/156 (46.15%), Postives = 93/156 (59.62%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKI 468
            GNY  V  A+A+AP +S+ R VIY+K   Y            L ++ DG D TI T +L+  +   TF +AT A  GDGFI  D+  +NT  P K   V LRV+ D S+I RCR++ YQD LY H NRQ YR+ ++  TVDFI GNAA V Q C+I
Sbjct:   86 GNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.562e-33
Identity = 85/267 (31.84%), Postives = 129/267 (48.31%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCV--IYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            G++  ++EA+ S P N     +  I+VK G Y            + + G     T    S    DG    +S T+ +    F+ + L IQN  G    +AVALRV+AD++    C I +YQDTL       ++++CYI G  DFI G+A+ + + C + +  P    +  +TAQ R    + +G +   C +          GS  ++LGRPW  YSR V   S   + + P GW++W       T+YYGEY   GPGA   +RV+W
Sbjct:   59 GDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSP---NNGSITAQMRTSATEKSGFTFLGCKLT---------GSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEW 308          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.047e-30
Identity = 83/270 (30.74%), Postives = 124/270 (45.93%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTA-----GPEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKI--AARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRV 789
            GN+  V+ A+   PD S ++ +I V  G+Y            L+I G G   T    +        T  S +  V    F A ++  +N A     G    QAVALR+  DQ+    C     QDTL     R F+++C+I G++DFIFGN   + Q+C I   A+   S  +  +TAQGR   ++ +G S   C +  S ++          LGR W  Y+  V   +++   I P GW+ W      KT+ +GE+   GPGA   +RV
Sbjct:   99 GNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEI---------LLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERV 359          
The following BLAST results are available for this feature:
BLAST of GO241839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_BRANA2.162e-6044.40Probable pectinesterase/pectinesterase inhibitor O... [more]
PME5_ARATH2.643e-5843.28Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_BRACM4.508e-5843.28Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME8_ARATH2.572e-3733.94Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME53_ARATH9.773e-3735.14Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME31_ARATH1.411e-3531.64Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME62_ARATH3.843e-3333.57Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME57_ARATH6.556e-3346.15Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]
PME11_ARATH8.562e-3331.84Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME15_ARATH1.047e-3030.74Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank description487 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 624 5, mRNA sequence.