GO241839

Overview
NameGO241839
Unique NameGO241839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.912e-24
Identity = 78/300 (26.00%), Postives = 138/300 (46.00%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGST----TFKSATIAVGGDGFIAQDLWIQNTA----GPEKH-QAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNQKKQKIYSS*AYLRRAWW 873
            G +KT+ +A+ S P  +  R +I +  G Y            + ++G    + + T      DG+     T  SA++ +  D F+A ++ ++NTA    G  K  QA+++R+S + +    C+   +QDT+   T   F++DCY+ GT DFIFG+   +    ++     +     ++ A       + +G S   C V  +       G I  YLGR W  + + V   + +   ++P GW E       KT++YGEY   GPG+  +KRV    +    + K+   + S  Y++ + W
Sbjct:   74 GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTG------GGI--YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRVP---FTQDIDDKEANCFLSLGYIQGSKW 354          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.261e-24
Identity = 78/300 (26.00%), Postives = 138/300 (46.00%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGST----TFKSATIAVGGDGFIAQDLWIQNTA----GPEKH-QAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNQKKQKIYSS*AYLRRAWW 873
            G +KT+ +A+ S P  +  R +I +  G Y            + ++G    + + T      DG+     T  SA++ +  D F+A ++ ++NTA    G  K  QA+++R+S + +    C+   +QDT+   T   F++DCY+ GT DFIFG+   +    ++     +     ++ A       + +G S   C V  +       G I  YLGR W  + + V   + +   ++P GW E       KT++YGEY   GPG+  +KRV    +    + K+   + S  Y++ + W
Sbjct:   74 GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTG------GGI--YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRVP---FTQDIDDKEANRFLSLGYIQGSKW 354          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.259e-24
Identity = 79/276 (28.62%), Postives = 121/276 (43.84%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAG-PEKHQ--------AVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQ--SNMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            GN+ T+++A+ S P N++    I VK G Y            +++VG G  LT     +   D  +  +S T +   D  + + +   N+   P K +        AVA  +  D+S          QDTL+    R ++  C I G VDFIFG    + Q+C I       +   +  +TAQGR +P    G     C V          G+  ++LGRPW+ YSR +   S++ D + P GW  W+       L + E+   G GA   +RVKW
Sbjct:   42 GNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRLT----RVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVY---------GTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW 304          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.819e-21
Identity = 98/308 (31.82%), Postives = 138/308 (44.81%), Query Frame = 1
Query:    7 YKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTI-----STGSLNVVDGST--TFKSATIAVGGDGFIAQDLWIQN--------------TAGPEKHQAVALRV--SADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRA---DPNQNTGTSIQKCDVIASSDLEPVKGSIRSY-LGRPW--------------KEYSRTVVMQSHIGDHIDPAGWSEWSG-DFALKTLYYG-------EYLNRGPGAGTSK 783
            +KT+ +A+ASAP  S T  VI +K G Y            L++ G+  +  +     + G+L   DGS   T  S+TI +    F AQ L I+N              ++  +  QAVAL V  S D++      +  YQDTLY    R F+ DC I+GTVDFIFG+   +  NC + +R     +S  V+    A   + NQ  G  I    VI  SD  P K    SY LGRPW                  +TV + + + +HI   GW + SG D    T+++        EY + G GA  SK
Sbjct:   42 FKTIADAIASAPAGS-TPFVILIKNGVYNERLTITRNN--LLLKGESRNGAVIAAATAAGTLKS-DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAK----SYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGAAVSK 339          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.873e-20
Identity = 98/308 (31.82%), Postives = 137/308 (44.48%), Query Frame = 1
Query:    7 YKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTI-----STGSLNVVDGST--TFKSATIAVGGDGFIAQDLWIQN--------------TAGPEKHQAVALRV--SADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSNMVTAQGRA---DPNQNTGTSIQKCDVIASSDLEPVKGSIRSY-LGRPW--------------KEYSRTVVMQSHIGDHIDPAGWSEWSG-DFALKTLYYG-------EYLNRGPGAGTSK 783
            +KT+ +A+ASAP  S T  VI +K G Y            L + G+  +  +     + G+L   DGS   T  S+TI +    F AQ L I+N              ++  +  QAVAL V  S D++      +  YQDTLY    R F+ DC I+GTVDFIFG+   +  NC + +R     +S  V+    A   + NQ  G  I    VI  SD  P K    SY LGRPW                  +TV + + + +HI   GW + SG D    T+++        EY + G GA  SK
Sbjct:   42 FKTIADAIASAPAGS-TPFVILIKNGVYNERLTITRNN--LHLKGESRNGAVIAAATAAGTLKS-DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAK----SYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVSK 339          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.852e-19
Identity = 71/274 (25.91%), Postives = 111/274 (40.51%), Query Frame = 1
Query:    1 GNYKTVKEAVASAPDNSKTRCVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTISTGSLNVVDGSTTFKSATIAVGGDGFIAQDLWIQNTAG------PEKHQAVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKIAARKPMSKQSN---MVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            GN+ TV+ A+ S    +     ++ + G Y            + + G G++ T+    +   D   T  SAT     D  +   +  +NT         E   AVA R+  D+ V+        QDTL+    R +Y+ C I+G +DFIFG    + + C +     +    N    +TA  R  P+   G     C          V G  ++ LGR W   +R +  +S + D + P GW  W      + L + E    G GA TS+RV W
Sbjct:   43 GNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQGKGIEQTV----IEYDDHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW 303          
BLAST of GO241839 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.327e-17
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 1
Query:  292 AVALRVSADQSVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVLQNCKI--AARKPMSKQS-NMVTAQGRADPNQNTGTSIQKCDVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKW 795
            AVA+ V  D+S    C     QDT++ +  R  +++CYI G +DFIFG+   V ++C I   A    SK S   +TAQGR+  +  +G    +           V GS   YLGR +  +SR + +Q+ +   + P GW  W       +  Y E   +G G+  S+RV W
Sbjct:  101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLR---------GSVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW 262          
The following BLAST results are available for this feature:
BLAST of GO241839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME48_ARATH1.912e-2426.00Probable pectinesterase 48 OS=Arabidopsis thaliana... [more]
PPME1_ARATH3.261e-2426.00Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PP... [more]
PME29_ARATH4.259e-2428.62Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PMEA_ERWCH9.819e-2131.82Pectinesterase A OS=Erwinia chrysanthemi GN=pemA P... [more]
PMEA_DICD34.873e-2031.82Pectinesterase A OS=Dickeya dadantii (strain 3937)... [more]
PME66_ARATH1.852e-1925.91Probable pectinesterase 66 OS=Arabidopsis thaliana... [more]
PME52_ARATH1.327e-1732.16Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank description487 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 624 5, mRNA sequence.