GO241701

Overview
NameGO241701
Unique NameGO241701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A1_PSAMI (Late histone H2A.1 OS=Psammechinus miliaris PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.743e-33
Identity = 72/113 (63.72%), Postives = 80/113 (70.80%), Query Frame = 2
Query:  155 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 493
            K +KS +RS +AGLQFPVGR+ RFLK G Y  RVGAGAP                  GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LLPKK  K
Sbjct:   10 KGTKSKTRSSRAGLQFPVGRVHRFLKKGNYGSRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_PARLI (Histone H2A OS=Paracentrotus lividus PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 71/111 (63.96%), Postives = 81/111 (72.97%), Query Frame = 2
Query:  161 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 493
            +K+ SRS +AGLQFPVGR+ RFL+ G YA+RVG GAP                  GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LLPKK GK
Sbjct:   12 TKAKSRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGK 122          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 2
Query:  158 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            A  S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNKK RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK  K K     ASQE
Sbjct:   12 AKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK-----ASQE 129          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 73/110 (66.36%), Postives = 80/110 (72.73%), Query Frame = 2
Query:  164 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 493
            K VSRS KAGLQFPVGRI RFLK G+YA+RVG+GAP                  GNAARDNKKNRI+PRH+ LAVRNDEEL KLL  VTIA+GGVLPNI+  LLPKK  K
Sbjct:   22 KPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEK 131          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2AX_DANRE (Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 71/122 (58.20%), Postives = 84/122 (68.85%), Query Frame = 2
Query:  161 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP                  GNAARDNKK RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LLPKK G+     G + ++
Sbjct:   13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGQAAASSGKSGKK 134          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 74/120 (61.67%), Postives = 85/120 (70.83%), Query Frame = 2
Query:  167 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K    K   G+ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAK----KAKAGNASQE 130          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A2_CANAL (Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 73/120 (60.83%), Postives = 85/120 (70.83%), Query Frame = 2
Query:  167 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K    K   G+ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQSLLPAK----KAKAGAASQE 130          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_EMENI (Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAGKG 128          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_ASPOR (Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
The following BLAST results are available for this feature:
BLAST of GO241701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A1_PSAMI5.743e-3363.72Late histone H2A.1 OS=Psammechinus miliaris PE=2 S... [more]
H2A_PARLI7.501e-3363.96Histone H2A OS=Paracentrotus lividus PE=3 SV=2[more]
H2A_KLULA7.501e-3360.16Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 S... [more]
H2A_EUPES7.501e-3366.36Histone H2A OS=Euphorbia esula PE=2 SV=1[more]
H2AX_DANRE7.501e-3358.20Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3[more]
H2A2_DEBHA7.501e-3361.67Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=... [more]
H2A2_CANAL7.501e-3360.83Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=... [more]
H2A_NEOFI9.796e-3365.77Histone H2A OS=Neosartorya fischeri (strain ATCC 1... [more]
H2A_EMENI9.796e-3365.77Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV... [more]
H2A_ASPOR9.796e-3365.77Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=... [more]

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Properties
Property NameValue
Genbank description349 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 479 5, mRNA sequence.