GO241701

Overview
NameGO241701
Unique NameGO241701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_ASPNG (Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_ASPNC (Histone H2A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=httA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_ASPCL (Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  173 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 502
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_AGABI (Histone H2A OS=Agaricus bisporus PE=2 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.671e-32
Identity = 75/122 (61.48%), Postives = 85/122 (69.67%), Query Frame = 2
Query:  161 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            +KS+SRS KAGLQFPVGR+ R LK G YA+RVGAGAP                  GNAARDNKK RIVPRH+QLA+RNDEEL KLLG+V I+ GGV+P+I   LLP K  KGK D G  SQE
Sbjct:   18 TKSMSRSSKAGLQFPVGRVHRLLKKGNYAQRVGAGAPVYMAAVLEYLAAEILELAGNAARDNKKQRIVPRHLQLAIRNDEELHKLLGNVVISQGGVVPHIAPELLPSKSSKGKKDEG-VSQE 138          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.671e-32
Identity = 74/120 (61.67%), Postives = 84/120 (70.00%), Query Frame = 2
Query:  167 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K    K   G ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAK----KAKPGKASQE 130          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.182e-32
Identity = 72/121 (59.50%), Postives = 83/121 (68.60%), Query Frame = 2
Query:  164 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            K VSRS KAGLQFPVGRI R+LK G+YA+RVG GAP                  GNAARDNKKNRI+PRH+ LA+RNDEEL KLL  VTIA+GGVLPNI+  LLPKK  +       AS++
Sbjct:   24 KPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKPAKASKD 144          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.182e-32
Identity = 72/121 (59.50%), Postives = 83/121 (68.60%), Query Frame = 2
Query:  164 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 526
            K VSRS KAGLQFPVGRI R+LK G+YA+RVG GAP                  GNAARDNKKNRI+PRH+ LA+RNDEEL KLL  VTIA+GGVLPNI+  LLPKK  +       AS++
Sbjct:   24 KPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKPAKASKD 144          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_PARAN (Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.850e-32
Identity = 70/109 (64.22%), Postives = 78/109 (71.56%), Query Frame = 2
Query:  164 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG 490
            K+ SRS +AGLQFPVGR+ RFL+ G YA RVGAGAP                  GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI   LLPKK G
Sbjct:   13 KAKSRSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTG 121          
BLAST of GO241701 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.850e-32
Identity = 72/117 (61.54%), Postives = 81/117 (69.23%), Query Frame = 2
Query:  164 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGS 514
            KSVSRS KAGLQFPVGRI R+LK G+YA+ VG GAP                  GNAARDNKK RI+PRH+ LA+RNDEEL KLLG VTIA+GGVLPNI+  LLPKK  +     GS
Sbjct:   27 KSVSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAEKASSGGS 143          
The following BLAST results are available for this feature:
BLAST of GO241701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A_ASPNG9.796e-3365.77Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1[more]
H2A_ASPNC9.796e-3365.77Histone H2A OS=Aspergillus niger (strain CBS 513.8... [more]
H2A_ASPFU9.796e-3365.77Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 ... [more]
H2A_ASPCL9.796e-3365.77Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 S... [more]
H2A_AGABI1.671e-3261.48Histone H2A OS=Agaricus bisporus PE=2 SV=3[more]
H2A2_PICST1.671e-3261.67Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1[more]
H2A6_ORYSJ2.182e-3259.50Probable histone H2A.6 OS=Oryza sativa subsp. japo... [more]
H2A6_ORYSI2.182e-3259.50Probable histone H2A.6 OS=Oryza sativa subsp. indi... [more]
H2A_PARAN2.850e-3264.22Histone H2A, gonadal OS=Parechinus angulosus PE=1 ... [more]
H2A_MAIZE2.850e-3261.54Histone H2A OS=Zea mays PE=2 SV=1[more]

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Properties
Property NameValue
Genbank description349 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 479 5, mRNA sequence.