GO241622

Overview
NameGO241622
Unique NameGO241622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.326e-43
Identity = 95/160 (59.38%), Postives = 116/160 (72.50%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTN-VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEISG 548
            MSLIP IFG RR++ +FDP S+DV+DPF       L    +++ ETS FAN RIDWKETP+AHVFKADLPGL+           R+LQISGER+ E+E+KNDKW RVERSSGKF+RRFRLP+NAK++QVKASME     +        KKP+VK+IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPF-----RELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVL-TVTVPKEEMKKPDVKSIEISG 154          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.859e-43
Identity = 95/162 (58.64%), Postives = 117/162 (72.22%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTN-VFDPVSLDVWDPFD--GFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEISG 548
            MSLIP IFG RR++ +FDP S+DV+DPF   GF S+       ++ E+S FAN RIDWKETP+ HVFK DLPGL+           R+LQISGER+ E+E+KNDKWHR+ERSSGKF+RRFRLP+NAK++QVKASME     +        KKPEVK+IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVL-TVTVPKEEVKKPEVKSIEISG 154          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.040e-43
Identity = 91/156 (58.33%), Postives = 108/156 (69.23%), Query Frame = 3
Query:  102 RRTNVFDPVSLDVWDPFDGF-------LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEISG 548
            RR N FDP SLD+WDP DGF        SS+ +  P +  + + FA ARIDWKETP+ HVFKAD+PGL+          G ILQISGERS+EQEEK+DKWHRVERSSGKFLRRFRLP+N K EQ+KASME     +        KKP+VK+I+ISG
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL-TVTVPKEEPKKPDVKSIQISG 159          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.583e-43
Identity = 94/162 (58.02%), Postives = 118/162 (72.84%), Query Frame = 3
Query:   72 MSLIPSIF--GGRRTNVFDPVSLD-VWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEI 542
            MSLIP+ +   GRR+N+FDP SLD +WDPF G L S L+  P S  A ET+ FANARIDWKETP+AHVFKADLPG++          G +L+ISG+R++E+EEKND WHRVERSSG+F+R+FRLP+NAKV+QVKA ME      +   N    KP+VKAI +
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPFFG-LPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKN-EAPKPQVKAINV 160          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.118e-41
Identity = 88/160 (55.00%), Postives = 110/160 (68.75%), Query Frame = 3
Query:   72 MSLIPSIFGG-RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEISG 548
            MS+IPS F   RR+N+FDP SLDVWDPF    SS+L+      RE S   NAR+DW+ETP+AHVFKADLPGL+            +L+ISGER  E+E+KND WHRVERSSG+F RRFRLP+N K++QVKA+ME     +        KK +VK+I+ISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVL-TVTVPKAETKKADVKSIQISG 153          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40
Identity = 88/150 (58.67%), Postives = 109/150 (72.67%), Query Frame = 3
Query:  102 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEISG 548
            RR+NVFDP + D+W DPFD F S     +  S+ ET+ FANAR+DWKETP+AHVFK DLPG++          G +L +SGERS+E+E+KNDKWHRVERSSGKF+RRFRLP++AKVE+VKA +E     +        KKPEVKAIEISG
Sbjct:    5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVL-TVTVPKAEVKKPEVKAIEISG 151          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40
Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 3
Query:  120 DPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEIS 545
            DP SLDVWDPF  F  +++  +A S  +E S F + RIDWKETP+AHVFKADLPGL+           R+LQISGER+ E+E+KND+WHRVERSSGKF+RRFRLP+NAK++QVKA+ME     +        KKPEVK+IEIS
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVL-TVTVPKEEIKKPEVKSIEIS 142          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39
Identity = 87/150 (58.00%), Postives = 107/150 (71.33%), Query Frame = 3
Query:  102 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEWCAHSSPFLNRREKKPEVKAIEISG 548
            RRTNVFDP + D+W DPFD F  S +        ET+ FANAR+DWKETP+AHVFKADLPG++          G +L +SGER+KE+E+KNDKWHRVERSSGKF+RRFRL ++AKVE+VKA +E     +        KKPEVKAI+ISG
Sbjct:    5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVL-TVTVPKAEVKKPEVKAIQISG 151          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.381e-39
Identity = 86/162 (53.09%), Postives = 108/162 (66.67%), Query Frame = 3
Query:   72 MSLIPSIFGGRR--TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEW-CAHSSPFLNRREKKPEVKAIEISG 548
            MSLIPS FG  R   ++FDP SLDVWDPF       L    S + ETS   NAR+DWKET +AHVFKADLPG++            +L+ISGER  E+EEK D WHRVERSSG+F R+F+LP+N K++QVKASME      + P +   +KK +VK+I+ISG
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPF-----KELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157          
BLAST of GO241622 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.767e-39
Identity = 88/163 (53.99%), Postives = 108/163 (66.26%), Query Frame = 3
Query:   72 MSLIPSIFGGRR---TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMEEW-CAHSSPFLNRREKKPEVKAIEISG 548
            MSLIPS FG  R    N+FDP SLDVWDPF           PSS+  +S  ANAR+DWKET +AHVFKADLPG++            +L+ISGER  E+EEK D WHRVERSSG F R+FRLP+N K++QVKASME      + P +   +KK +VK+I+ISG
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155          
The following BLAST results are available for this feature:
BLAST of GO241622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
HSP11_SOLPE1.326e-4359.3817.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLLC3.859e-4358.6417.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS177_ORYSJ5.040e-4358.3317.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_CHERU6.583e-4358.0218.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS17B_ARATH2.118e-4155.0017.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HS16A_WHEAT1.793e-4058.6716.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HSP11_MEDSA5.216e-4058.7418.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS16B_WHEAT1.518e-3958.0016.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HS178_ARATH3.381e-3953.0917.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17A_ARATH5.767e-3953.9917.6 kDa class I heat shock protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank description270 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 392 5, mRNA sequence.