GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2)

HSP 1 Score: 47.3654 bits (111), Expect = 3.523e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 3.523e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F  +L SL + +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGNLLKSL-IGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 47.3654 bits (111), Expect = 3.523e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 3.523e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F  +L SL + +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGNLLKSL-IGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 47.3654 bits (111), Expect = 3.523e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 3.523e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F  +L SL + +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGNLLKSL-IGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 47.3654 bits (111), Expect = 3.523e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 3.523e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F  +L SL + +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGNLLKSL-IGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 47.3654 bits (111), Expect = 3.523e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 3.523e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F  +L SL + +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGNLLKSL-IGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 47.3654 bits (111), Expect = 3.523e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.6614 bits (91), Expect = 3.523e-11
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F  +L SL + +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGNLLKSL-IGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3)

HSP 1 Score: 51.6026 bits (122), Expect = 4.547e-11
Identity = 19/56 (33.93%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            I F  +D+GG +  R++W+ Y+     ++++VD+ D ER +E++ EL  +L+D  L
Sbjct:   61 INFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNEL 116          

HSP 2 Score: 35.039 bits (79), Expect = 4.547e-11
Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 1
Query:  142 LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +A   L + + +IL +GLD +GKTT+L+ LK   +V   PT     E  EY
Sbjct:    8 IAKRFLPKSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 4.570e-11
Identity = 21/67 (31.34%), Postives = 40/67 (59.70%), Query Frame = 2
Query:  305 KFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQK 505
            K   +D+GG +  R  W++Y+   D ++++VD+ D++R  + +REL +LL +E LA      F  ++
Sbjct:   61 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQ 127          

HSP 2 Score: 35.8094 bits (81), Expect = 4.570e-11
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 1
Query:  139 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            IL  +   ++E ++L LGLDNAGKTT+L     E +    PT
Sbjct:    6 ILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDVDTISPT 47          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2)

HSP 1 Score: 48.521 bits (114), Expect = 4.570e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 38.1206 bits (87), Expect = 4.570e-11
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2)

HSP 1 Score: 48.521 bits (114), Expect = 4.570e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 38.1206 bits (87), Expect = 4.570e-11
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ARF3_TAKRU3.523e-1126.74ADP-ribosylation factor 3 OS=Takifugu rubripes GN=... [more]
ARF3_RAT3.523e-1126.74ADP-ribosylation factor 3 OS=Rattus norvegicus GN=... [more]
ARF3_PONAB3.523e-1126.74ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ... [more]
ARF3_MOUSE3.523e-1126.74ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN3.523e-1126.74ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN3.523e-1126.74ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF4_ARATH4.547e-1133.93Probable ADP-ribosylation factor At2g15310 OS=Arab... [more]
ARL2_MOUSE4.570e-1131.34ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARF1_LOCMI4.570e-1126.74ADP-ribosylation factor 1 OS=Locusta migratoria GN... [more]
ARF1_DROME4.570e-1126.74ADP-ribosylation factor 1 OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.