GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 5.938e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 38.1206 bits (87), Expect = 5.938e-11
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 48.1358 bits (113), Expect = 5.938e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 38.1206 bits (87), Expect = 5.938e-11
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 5.938e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 38.1206 bits (87), Expect = 5.938e-11
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 47.7506 bits (112), Expect = 5.938e-11
Identity = 17/56 (30.36%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            I F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL ++L+++ L
Sbjct:   61 ISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDEL 116          

HSP 2 Score: 38.5058 bits (88), Expect = 5.938e-11
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 1
Query:  139 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            + ASL L ++E +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    8 LFASL-LGRREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 46.9802 bits (110), Expect = 5.938e-11
Identity = 22/86 (25.58%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 39.2762 bits (90), Expect = 5.938e-11
Identity = 24/54 (44.44%), Postives = 31/54 (57.41%), Query Frame = 1
Query:  133 YGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +G L S    +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    5 FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 7.690e-11
Identity = 21/59 (35.59%), Postives = 35/59 (59.32%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANV 478
            +    +D+GG    R +WK YY   +A++++VD+ D+ER  E K E+D LL  + L  +
Sbjct:   69 LSMTVWDVGGQHKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDNLLIQDELKGI 127          

HSP 2 Score: 35.4242 bits (80), Expect = 7.690e-11
Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            F+  + SL   +K+ +IL +GLD AGK+TLL  LK   +V   PT
Sbjct:   12 FFSNIFSLFEGKKDTRILMIGLDGAGKSTLLFKLKLGDVVLTIPT 56          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 7.702e-11
Identity = 21/67 (31.34%), Postives = 40/67 (59.70%), Query Frame = 2
Query:  305 KFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQK 505
            K   +D+GG +  R  W++Y+   D ++++VD+ D++R  + +REL +LL +E LA      F  ++
Sbjct:   61 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQ 127          

HSP 2 Score: 35.039 bits (79), Expect = 7.702e-11
Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = 1
Query:  139 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            IL  +   +++ ++L LGLDNAGKTT+L     E +    PT
Sbjct:    6 ILKKMKQKERDVRLLMLGLDNAGKTTILKKFNGEDVDTISPT 47          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 7.702e-11
Identity = 21/67 (31.34%), Postives = 39/67 (58.21%), Query Frame = 2
Query:  305 KFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQK 505
            K   +D+GG +  R  W++Y+   D ++++VD+ D++R  + +REL  LL +E LA      F  ++
Sbjct:   61 KLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQ 127          

HSP 2 Score: 36.1946 bits (82), Expect = 7.702e-11
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 1
Query:  139 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            IL  +   ++E ++L LGLDNAGKTT+L     E +    PT
Sbjct:    6 ILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPT 47          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3)

HSP 1 Score: 51.6026 bits (122), Expect = 7.708e-11
Identity = 19/56 (33.93%), Postives = 37/56 (66.07%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            I F  +D+GG    R +W+ YY+  D ++++VD+ D+ER  +++ EL  ++++E L
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEEL 116          

HSP 2 Score: 34.2686 bits (77), Expect = 7.708e-11
Identity = 18/44 (40.91%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +K+ +IL +GLD AGKTT+L+ +K   +V   PT     E  E+
Sbjct:   15 KKDVRILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEF 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 9.990e-11
Identity = 26/84 (30.95%), Postives = 47/84 (55.95%), Query Frame = 2
Query:  281 RKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXK 532
            RK++ G +  K +D+GG    + +W+ Y   ++A+VY++DA D+E+   S+ EL  LL    L  +P    G ++ + + L  K
Sbjct:   58 RKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEK 141          

HSP 2 Score: 30.0314 bits (66), Expect = 9.990e-11
Identity = 12/38 (31.58%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHML 231
            L DWF  +      W++E ++  +GL  +GKTT ++++
Sbjct:    8 LLDWFRSLF-----WKEEMELTLVGLQYSGKTTFVNVI 40          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ARF2_ORYSJ5.938e-1126.74ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ5.938e-1126.74ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF1_CHLRE5.938e-1126.74ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF_CANAL5.938e-1130.36ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF1_ARATH5.938e-1125.58ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARFK_DICDI7.690e-1135.59ADP-ribosylation factor K OS=Dictyostelium discoid... [more]
ARL2_RAT7.702e-1131.34ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL2_BOVIN7.702e-1131.34ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARF1_PLAFA7.708e-1133.93ADP-ribosylation factor 1 OS=Plasmodium falciparum... [more]
ARL8B_BOVIN9.990e-1130.95ADP-ribosylation factor-like protein 8B OS=Bos tau... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.