GO241591

Overview
NameGO241591
Unique NameGO241591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.811e-71
Identity = 126/137 (91.97%), Postives = 134/137 (97.81%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTD++LL+Q+KDGFAEGK+L
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKDL 137          

HSP 2 Score: 23.483 bits (49), Expect = 1.811e-71
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G++LV++VMS+MGE
Sbjct:  134 GKDLVVSVMSAMGE 147          

HSP 3 Score: 22.7126 bits (47), Expect = 1.811e-71
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  541 QICALKDIGPK 573
            QI ALKDIGPK
Sbjct:  149 QINALKDIGPK 159          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.811e-71
Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTDE LL+ +KDGFAEGK+L
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDL 137          

HSP 2 Score: 23.483 bits (49), Expect = 1.811e-71
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G++LV++VMS+MGE
Sbjct:  134 GKDLVVSVMSAMGE 147          

HSP 3 Score: 22.7126 bits (47), Expect = 1.811e-71
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  541 QICALKDIGPK 573
            QI ALKDIGPK
Sbjct:  149 QINALKDIGPK 159          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.072e-71
Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSDEEH FESKADAGASKTYPQQAGTIRK G+IVIK+R CKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD+ LLTQ+KDGF EGK+L
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDL 137          

HSP 2 Score: 27.335 bits (59), Expect = 3.072e-71
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  541 QICALKDIGPK 573
            QICALKDIGPK
Sbjct:  149 QICALKDIGPK 159          

HSP 3 Score: 23.483 bits (49), Expect = 3.072e-71
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G++LV++VMS+MGE
Sbjct:  134 GKDLVVSVMSAMGE 147          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 3.843e-71
Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE LL Q+KDGF EGK+L
Sbjct:    1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDL 137          

HSP 2 Score: 23.483 bits (49), Expect = 3.843e-71
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G++LV++VMS+MGE
Sbjct:  134 GKDLVVSVMSAMGE 147          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 1.951e-70
Identity = 125/138 (90.58%), Postives = 134/138 (97.10%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDI-VPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLE++ VPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD++LLTQ+KDGFAEGK+L
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDL 138          

HSP 2 Score: 24.2534 bits (51), Expect = 1.951e-70
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  541 QICALKDIGPKS 576
            QICALKDIG K+
Sbjct:  150 QICALKDIGGKN 161          

HSP 3 Score: 23.483 bits (49), Expect = 1.951e-70
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G++LV++VMS+MGE
Sbjct:  135 GKDLVVSVMSAMGE 148          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 4.576e-69
Identity = 121/138 (87.68%), Postives = 132/138 (95.65%), Query Frame = 2
Query:   95 MSD-EEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSD EEHHFESKADAGASKTYPQQAGT+RKNG+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCD+PHVNRT+YQLIDISEDGFVSLLT +GNTKDDLRLPTDETL+ Q+K+GF  GK+L
Sbjct:    1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDL 138          

HSP 2 Score: 26.9498 bits (58), Expect = 4.576e-69
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  541 QICALKDIGPK 573
            QICALKD+GPK
Sbjct:  150 QICALKDVGPK 160          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.142e-67
Identity = 119/137 (86.86%), Postives = 130/137 (94.89%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG+VSLLT+NG+TKDDL+LP D+TLL Q+K GF +GK+L
Sbjct:    1 MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDL 136          

HSP 2 Score: 23.483 bits (49), Expect = 9.142e-67
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G++LV++VMS+MGE
Sbjct:  133 GKDLVVSVMSAMGE 146          

HSP 3 Score: 22.7126 bits (47), Expect = 9.142e-67
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  541 QICALKDIGPK 573
            QI ALKDIGPK
Sbjct:  148 QINALKDIGPK 158          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.457e-66
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNR DYQLIDISEDGFVSLLT+NG+TKDDL+LPTDE LLTQLK+GF EGK++
Sbjct:    1 MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDI 136          

HSP 2 Score: 24.2534 bits (51), Expect = 4.457e-66
Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  541 QICALKDIGPK 573
            Q+CALK++GPK
Sbjct:  148 QMCALKEVGPK 158          

HSP 3 Score: 22.7126 bits (47), Expect = 4.457e-66
Identity = 8/14 (57.14%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G+++V++VMS+MGE
Sbjct:  133 GKDIVVSVMSAMGE 146          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.742e-64
Identity = 113/137 (82.48%), Postives = 129/137 (94.16%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSD++HHFES ADAGASKTYPQQAGTIRK+G+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNR DYQL+DI+EDGFVSLLT++G+TKDDL+LP DE L+ Q+K+GF  GK+L
Sbjct:    1 MSDDDHHFESSADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFEAGKDL 137          
BLAST of GO241591 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 7.627e-60
Identity = 107/137 (78.10%), Postives = 124/137 (90.51%), Query Frame = 2
Query:   95 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKEL 505
            MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNR DYQLIDI+EDGFVSLLT++G TKDDL+LPTD+ L  Q++ GF EGK++
Sbjct:    1 MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDI 136          

HSP 2 Score: 23.8682 bits (50), Expect = 7.627e-60
Identity = 9/14 (64.29%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  495 GRNLVLTVMSSMGE 536
            G+++V++VMSSMGE
Sbjct:  133 GKDIVVSVMSSMGE 146          
The following BLAST results are available for this feature:
BLAST of GO241591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
IF5A4_SOLTU1.811e-7191.97Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A3_SOLLC1.811e-7192.70Eukaryotic translation initiation factor 5A-3 OS=S... [more]
IF5A_SENVE3.072e-7190.51Eukaryotic translation initiation factor 5A OS=Sen... [more]
IF5A2_SOLLC3.843e-7192.70Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A1_MEDSA1.951e-7090.58Eukaryotic translation initiation factor 5A-1 OS=M... [more]
IF5A_MAIZE4.576e-6987.68Eukaryotic translation initiation factor 5A OS=Zea... [more]
IF5A1_ARATH9.142e-6786.86Eukaryotic translation initiation factor 5A-1 OS=A... [more]
IF5A3_ARATH4.457e-6686.13Eukaryotic translation initiation factor 5A-3 OS=A... [more]
IF5A_DIACA1.742e-6482.48Eukaryotic translation initiation factor 5A OS=Dia... [more]
IF5A2_ARATH7.627e-6078.10Eukaryotic translation initiation factor 5A-2 OS=A... [more]

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Properties
Property NameValue
Genbank description239 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 358 5, mRNA sequence.