GO241578

Overview
NameGO241578
Unique NameGO241578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKC_CRIFA (Phosphoglycerate kinase, glycosomal OS=Crithidia fasciculata GN=PGKC PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.314e-27
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 2 
Query:   95 IKMAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV---TPK-----------YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE 481
            + +  KKS+    +A +KGK+V +RVD NVP+  N  IT+D R+R+A+PTI+ ++  G   IL SHLGRPKG     PK            +L+P+  RLSELLG +V+ A DC+  +     A++  G VLLLENVRF+ EE
Sbjct:    1 MSLVPKKSID---DAVVKGKKVLIRVDFNVPVK-NGEITNDFRIRSALPTIQKVLKEGGSCILMSHLGRPKGAKMSDPKPAKSVRGYEEAATLRPVAARLSELLGQKVEFAPDCL--DAASYAAKLKGGDVLLLENVRFYAEE 137

HSP 2 Score: 40.817 bits (94), Expect = 1.314e-27
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 3 
Query:  504 AKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            AK LA+  D+YV+DAFG+AHR  A   G+ K L    AG
Sbjct:  149 AKVLAAYGDVYVSDAFGTAHRDSADMTGIPKVLGAGYAG 187
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_ACTSZ (Phosphoglycerate kinase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=pgk PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.317e-27
Identity = 54/132 (40.91%), Postives = 82/132 (62.12%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSEL-LGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGPRV 502
            SV  + + DL GKRVF+R DLNVP+ D   +  D R+RA +PT+K  +  GAKV+++SHLGRP      P+ SL+P+V  L+   LGV V++  + +         ++  G +++LENVR +K E+KN P +
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVASDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLNNAELGVPVRLVQNYLDG------VDVQAGEIVVLENVRVNKGEKKNDPEL 126

HSP 2 Score: 48.9062 bits (115), Expect = 1.317e-27
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D E  KK A+L D++V DAFG+AHRA A T GVA++   + AG
Sbjct:  119 EKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEYAPVACAG 165
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_RENSM (Phosphoglycerate kinase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=pgk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.713e-27
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 2 
Query:  143 LKGKRVFVRVDLNVPL----DDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE 481
            ++G+ V VR DLNVPL    D NL +TDD R+RA++P I+ L   GA+V++ +HLGRPKG    KYSL+P   RL+EL  V V +A D  GE  +K  AE+ +G VL+LENVRF   E
Sbjct:   14 VQGRYVLVRSDLNVPLSGAEDTNLTVTDDGRIRASLPVIEKLAAAGARVLVLAHLGRPKGAPEAKYSLRPAADRLAELASVPVSLAADTSGESAQKAAAELADGQVLVLENVRFDPRE 131

HSP 2 Score: 30.0314 bits (66), Expect = 1.713e-27
Identity = 21/44 (47.73%), Postives = 25/44 (56.82%), Query Frame = 3 
Query:  498 EFAKKLASLAD---LYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            E A+  AS AD    YV+DAFG+ HR HA    +A  L PS  G
Sbjct:  145 ELAELAASGADKEAAYVDDAFGAVHRKHASVFDLALKL-PSFHG 187
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_JANSC (Phosphoglycerate kinase OS=Jannaschia sp. (strain CCS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.715e-27
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 2 
Query:  122 SVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGPRV 502
            + L + DL GK V  RVD+NVP+D +  +TD  R+   VPTIK ++  G + ++ +H GRPKG   P+ SL+  VP L + LG  V      I       +  +PEG + L+EN RF   EE N P++
Sbjct:    4 NTLDDMDLAGKLVLTRVDINVPVDGD-TVTDATRITRIVPTIKDILAKGGRPVMLAHFGRPKGAYVPEMSLRVTVPALEQALGQPVNF----IERPDRATLDALPEGTITLIENTRFSAMEEANDPKM 126

HSP 2 Score: 52.7582 bits (125), Expect = 1.715e-27
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:  492 DLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            D + A  LASL D+Y NDAF +AHRAHA TEGVA+ L PS AG
Sbjct:  123 DPKMAGFLASLGDVYCNDAFSAAHRAHASTEGVARLL-PSCAG 164
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_CHRVO (Phosphoglycerate kinase OS=Chromobacterium violaceum GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.715e-27
Identity = 58/123 (47.15%), Postives = 78/123 (63.41%), Query Frame = 2 
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPK--YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            L E +L GKR  +RVD+NVPL + + I DD R+RA++PTI++ +  GA V+L +HLGRP    PK   SL P+V RLSELLG  V++  D           E+  G V +LENVR +K E+KN
Sbjct:    6 LSEQNLSGKRALIRVDMNVPLKNGV-IGDDTRIRASLPTIEHCLKAGAAVLLMTHLGRPTEGEPKPEDSLAPVVARLSELLGKPVRLIADF------HAGVELAPGEVAMLENVRLNKGEKKN 121

HSP 2 Score: 45.4394 bits (106), Expect = 1.715e-27
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 3 
Query:  498 EFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            E  +  A+L D++V+DAFG+AHRA A T  VAKF   + AG
Sbjct:  124 ELGRAYAALCDVFVHDAFGTAHRAEASTHAVAKFAPVACAG 164
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_SHISS (Phosphoglycerate kinase OS=Shigella sonnei (strain Ss046) GN=pgk PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.715e-27
Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKD 121

HSP 2 Score: 48.1358 bits (113), Expect = 1.715e-27
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T G+ KF   + AG
Sbjct:  118 EKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAG 164
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_SHIFL (Phosphoglycerate kinase OS=Shigella flexneri GN=pgk PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.715e-27
Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKD 121

HSP 2 Score: 48.1358 bits (113), Expect = 1.715e-27
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T G+ KF   + AG
Sbjct:  118 EKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAG 164
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_SHIF8 (Phosphoglycerate kinase OS=Shigella flexneri serotype 5b (strain 8401) GN=pgk PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.715e-27
Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKD 121

HSP 2 Score: 48.1358 bits (113), Expect = 1.715e-27
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T G+ KF   + AG
Sbjct:  118 EKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAG 164
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_SHIDS (Phosphoglycerate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pgk PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.715e-27
Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKD 121

HSP 2 Score: 48.1358 bits (113), Expect = 1.715e-27
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T G+ KF   + AG
Sbjct:  118 EKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAG 164
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_SHIBS (Phosphoglycerate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=pgk PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.715e-27
Identity = 53/127 (41.73%), Postives = 81/127 (63.78%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKD 121

HSP 2 Score: 48.1358 bits (113), Expect = 1.715e-27
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T G+ KF   + AG
Sbjct:  118 EKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAG 164
The following BLAST results are available for this feature:
BLAST of GO241578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKC_CRIFA1.314e-2744.06Phosphoglycerate kinase, glycosomal OS=Crithidia f... [more]
PGK_ACTSZ1.317e-2740.91Phosphoglycerate kinase OS=Actinobacillus succinog... [more]
PGK_RENSM1.713e-2750.85Phosphoglycerate kinase OS=Renibacterium salmonina... [more]
PGK_JANSC1.715e-2739.06Phosphoglycerate kinase OS=Jannaschia sp. (strain ... [more]
PGK_CHRVO1.715e-2747.15Phosphoglycerate kinase OS=Chromobacterium violace... [more]
PGK_SHISS1.715e-2741.73Phosphoglycerate kinase OS=Shigella sonnei (strain... [more]
PGK_SHIFL1.715e-2741.73Phosphoglycerate kinase OS=Shigella flexneri GN=pg... [more]
PGK_SHIF81.715e-2741.73Phosphoglycerate kinase OS=Shigella flexneri serot... [more]
PGK_SHIDS1.715e-2741.73Phosphoglycerate kinase OS=Shigella dysenteriae se... [more]
PGK_SHIBS1.715e-2741.73Phosphoglycerate kinase OS=Shigella boydii serotyp... [more]

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Properties
Property NameValue
Genbank description226 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 342 5, mRNA sequence.