GO241578

Overview
NameGO241578
Unique NameGO241578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_ROSDO (Phosphoglycerate kinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.343e-27
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGPRV 502
            S   L + D+ GKRV +RVD+NVP+++   +TD  R+   +PT++ ++  G   I+ +H GRPKG V P+ SL+  +P L   LG +V      I E   + ++++PEG V+LLEN RF   EE N P +
Sbjct:    2 SWKTLDDMDVAGKRVLLRVDINVPVEEG-QVTDRTRIDRIIPTLQDILAKGGTPIMLAHFGRPKGKVVPEMSLRVTLPALEAALGRKVTF----IEEPNAERLSDLPEGIVVLLENTRFAVGEEANDPEM 126          

HSP 2 Score: 49.6766 bits (117), Expect = 8.343e-27
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  492 DLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            D E A+ LA+L D++ NDAF +AHRAHA T GVA  L PS AG
Sbjct:  123 DPEMARFLATLGDVFCNDAFSAAHRAHASTTGVAHLL-PSCAG 164          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_PHOPR (Phosphoglycerate kinase OS=Photobacterium profundum GN=pgk PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.344e-27
Identity = 57/130 (43.85%), Postives = 86/130 (66.15%), Query Frame = 2
Query:  113 KSVSVLKEADLK--GKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            +++SV+K  DL+  GKRVF+R DLNVP+ D   +T D R+ A++PTIK  +  GAKV+++SHLGRP       ++SL P+V  L++ L  +VK+A D +         E+  G +++LENVRF+K E+KN
Sbjct:    4 RTMSVIKMTDLELAGKRVFIRADLNVPVKDG-KVTSDARILASLPTIKRCLEAGAKVMVTSHLGRPTEGEYNEEFSLAPVVNYLNDALDCDVKLAKDYLDG------IELNAGELVVLENVRFNKGEKKN 126          

HSP 2 Score: 43.1282 bits (100), Expect = 8.344e-27
Identity = 21/47 (44.68%), Postives = 30/47 (63.83%), Query Frame = 3
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T GV      + AG
Sbjct:  123 EKKNDEALSKKYAALCDIFVMDAFGTAHRAQASTHGVGMNAAIACAG 169          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_YEAST (Phosphoglycerate kinase OS=Saccharomyces cerevisiae GN=PGK1 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.637e-27
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = 2
Query:  101 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE 484
            M+    +SV ++ DLK KRVF+RVD NVPLD    IT + R+ AA+PTIKY++ H  + V+L+SHLGRP G    KYSL P+   L  LLG +V   NDC+G EVE  V     G V+LLEN+R+H EEE
Sbjct:    1 MSLSSKLSV-QDLDLKDKRVFIRVDFNVPLDGK-KITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEE 128          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_LEPCP (Phosphoglycerate kinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.086e-26
Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 2
Query:  125 VLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVK-MANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            ++    + G+RVF+R DLNVP DD  +IT+D R+RA++P I+  +  GA V+++SHLGRP      P+ SL P+  R+ EL+G E+  +AN   G        E+  G +++LEN R +K E+KN
Sbjct:    9 LIAAGQVAGQRVFIRADLNVPQDDAGHITEDTRIRASIPCIEMALKAGAAVMVTSHLGRPTEGEFKPEDSLAPVAARMGELMGREIPVIANWTDG-------VEVAPGQLVMLENCRLNKGEKKN 126          

HSP 2 Score: 50.0618 bits (118), Expect = 1.086e-26
Identity = 22/39 (56.41%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  504 AKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            A+K+A+L D++V+DAFG+AHRA A T G+A+F K + AG
Sbjct:  131 AQKMAALCDIFVHDAFGTAHRAEASTYGIAQFAKIACAG 169          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_VESOH (Phosphoglycerate kinase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=pgk PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.086e-26
Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPK--YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  L + DL  KRV +R DLNVP+ + + +T D R++A++PTIK  +  GAKV+L SH GRP    P   +SL+P+  RLSELL   V++  D +         E+  G V+L ENVRF+  E  N
Sbjct:    2 SVINLSDLDLNSKRVLIRQDLNVPISNGV-VTSDKRIKASLPTIKMALNQGAKVMLMSHRGRPIEGDPSDGFSLQPVADRLSELLNTTVRLEKDWLDG------VEMNNGKVVLCENVRFNVGEMVN 121          

HSP 2 Score: 47.3654 bits (111), Expect = 1.086e-26
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  492 DLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            D E +K++A++ D++V DAFG+AHRA A T GVAK+   + +G
Sbjct:  122 DDELSKRMAAICDIFVMDAFGTAHRAQASTYGVAKYAPIACSG 164          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_LARHH (Phosphoglycerate kinase OS=Laribacter hongkongensis (strain HLHK9) GN=pgk PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.086e-26
Identity = 57/123 (46.34%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPK--YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            L E  L GKRV +RVD+NVP+ + + I DD R+RA++P+I + +  GA VIL +HLGRP    PK   SL P+  RLSELL  EVK+  D       +   ++  G V++LENVR +K E+KN
Sbjct:    6 LTEQSLAGKRVLIRVDMNVPVKNGV-IGDDTRIRASLPSILHCLKAGASVILMTHLGRPTEGEPKPEDSLAPVARRLSELLAQEVKVIADW------QAGIDLKAGDVVMLENVRLNKGEKKN 121          

HSP 2 Score: 45.8246 bits (107), Expect = 1.086e-26
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 3
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ + E  +  A L D++VNDAFG+AHRA A T  VA+F   + AG
Sbjct:  118 EKKNNEELGRAYAGLCDVFVNDAFGTAHRAEASTHAVAQFAPVACAG 164          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_CELJU (Phosphoglycerate kinase OS=Cellvibrio japonicus (strain Ueda107) GN=pgk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.086e-26
Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRP-KGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            +V ++K+ DL GKRV +R DLNVPLD    IT   R+ AA+PT+K  +  GAKV + SHLGRP +GV     SL P+   LSE LG EV +  D I            +  ++LLENVRF+K E KN
Sbjct:    2 TVKLMKDQDLAGKRVLIREDLNVPLDGG-RITSTVRIDAAIPTLKAALEAGAKVAVMSHLGRPDEGVYDAAASLAPVAKYLSEKLGREVPLVQDWID-------GYSADADLVLLENVRFNKGEGKN 120          

HSP 2 Score: 49.2914 bits (116), Expect = 1.086e-26
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  492 DLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            D   A+K+A+L D++V DAFG+AHRA A T GVAKF   + AG
Sbjct:  121 DDALAQKMAALCDVFVMDAFGTAHRAQASTHGVAKFAPIACAG 163          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_ERWCT (Phosphoglycerate kinase OS=Erwinia carotovora subsp. atroseptica GN=pgk PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.086e-26
Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 2
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            SV  + + DL GKRV +R DLNVP+ +   +T D R+RA++PTI+  +  GA+V+++SHLGRP        +SL P+V  L E L   V++A D +         ++ EG +++LENVRF+K E+K+
Sbjct:    2 SVIKMTDLDLAGKRVLIRADLNVPVKEG-KVTSDARIRASLPTIEIALKQGARVMVTSHLGRPTEGEYNEDFSLLPVVDYLKEKLSSPVRLAKDYLDG------VDVAEGELVVLENVRFNKGEKKD 121          

HSP 2 Score: 47.7506 bits (112), Expect = 1.086e-26
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 3
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ D   +KK A+L D++V DAFG+AHRA A T GV KF   + AG
Sbjct:  118 EKKDDEVLSKKYAALCDVFVMDAFGTAHRAQASTHGVGKFATIACAG 164          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGKC_LEIME (Phosphoglycerate kinase, glycosomal OS=Leishmania mexicana GN=PGKC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.409e-26
Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   95 IKMAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV---TPK-----------YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE 481
            + +  KKS+    +  LK K+V +RVD NVP+  N  IT+D R+R+A+PTI+ ++  G   IL SHLGRPKG     PK            +L+P+   LSELL  +V  A DC+   +   V+++  G VLLLENVRF+ EE
Sbjct:    1 MSLVLKKSID---DVALKDKKVLIRVDFNVPVK-NGEITNDFRIRSALPTIQKVLKEGGSCILMSHLGRPKGARMSDPKPEKGVRGYEEAATLRPVAAALSELLEKKVAFAPDCLNASI--YVSKLKRGDVLLLENVRFYTEE 137          

HSP 2 Score: 44.669 bits (104), Expect = 1.409e-26
Identity = 23/39 (58.97%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  504 AKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            AK LAS ADLYV+DAFG+AHR  A   G+ K L    AG
Sbjct:  149 AKVLASYADLYVSDAFGTAHRDSATMTGIPKVLGSGYAG 187          
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_NEIMA (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup A GN=pgk PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.414e-26
Identity = 48/123 (39.02%), Postives = 75/123 (60.98%), Query Frame = 2
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK--GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            L E +++GK V +R D+NVP  D   I+DD R+RA++ ++KY + +GA VI+ +HLGRP      P+  + P+   L  LLG +VK+ ND       +    +  G V++L+NVR +K E+KN
Sbjct:    6 LTEQNVQGKTVLIRADMNVPFKDG-KISDDTRIRASIASVKYCVDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGSLLGKDVKVLNDW-----RENKPALNAGDVVMLQNVRINKGEKKN 122          

HSP 2 Score: 51.9878 bits (123), Expect = 1.414e-26
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 3
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            +++ DLE  K  ASL D++VNDAFG+AHRA A TE VA+    + AG
Sbjct:  119 EKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAPVACAG 165          
The following BLAST results are available for this feature:
BLAST of GO241578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ROSDO8.343e-2739.23Phosphoglycerate kinase OS=Roseobacter denitrifica... [more]
PGK_PHOPR8.344e-2743.85Phosphoglycerate kinase OS=Photobacterium profundu... [more]
PGK_YEAST8.637e-2751.54Phosphoglycerate kinase OS=Saccharomyces cerevisia... [more]
PGK_LEPCP1.086e-2640.80Phosphoglycerate kinase OS=Leptothrix cholodnii (s... [more]
PGK_VESOH1.086e-2643.31Phosphoglycerate kinase OS=Vesicomyosocius okutani... [more]
PGK_LARHH1.086e-2646.34Phosphoglycerate kinase OS=Laribacter hongkongensi... [more]
PGK_CELJU1.086e-2646.46Phosphoglycerate kinase OS=Cellvibrio japonicus (s... [more]
PGK_ERWCT1.086e-2640.94Phosphoglycerate kinase OS=Erwinia carotovora subs... [more]
PGKC_LEIME1.409e-2641.96Phosphoglycerate kinase, glycosomal OS=Leishmania ... [more]
PGK_NEIMA1.414e-2639.02Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]

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Properties
Property NameValue
Genbank description226 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 342 5, mRNA sequence.