GO241578

Overview
NameGO241578
Unique NameGO241578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_HYDS0 (Phosphoglycerate kinase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.212e-42
Identity = 69/120 (57.50%), Postives = 89/120 (74.17%), Query Frame = 2 
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEK 487
            +++ DLKGKRV VRVD NVP+D+  NI DD R+RAA+PTI+YL+   A VIL SHLGRPKG   KYSLKP+  RLS  +  +V MA DCIG+++E +V       V++LEN+RFHKEEE+
Sbjct:    7 IRDIDLKGKRVLVRVDFNVPIDNQGNIEDDARIRAAIPTIEYLLDAKAIVILMSHLGRPKGFDEKYSLKPVAKRLSRYIHKDVVMAPDCIGKDMENIVKNAKSEDVIMLENLRFHKEEEE 126

HSP 2 Score: 52.373 bits (124), Expect = 1.212e-42
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 3 
Query:  474 RRKRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + +   D EF+KKLASL ++YV+DAFG+ HR HA    V + LKP+  G
Sbjct:  122 KEEEECDEEFSKKLASLGEVYVSDAFGTCHRKHASVYCVPQILKPACMG 170
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_BORDL (Phosphoglycerate kinase OS=Borrelia duttonii (strain Ly) GN=pgk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.212e-42
Identity = 73/126 (57.94%), Postives = 92/126 (73.02%), Query Frame = 2 
Query:  116 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            S+  +K+ D  GKR  VR D NVPL +  NITDD R++AA+PTI+YL   GA+V+L SHLGRPKG    +YSL P+  RLSELLG  VKM +DCIG+EV   V+ +  G V+LLENVRF+KEEE+N
Sbjct:    2 SIRTIKDCDFSGKRALVRCDFNVPLREG-NITDDTRIKAALPTIEYLKSQGARVVLMSHLGRPKGEKNLRYSLMPIARRLSELLGQNVKMLSDCIGDEVVTAVSCMQNGDVVLLENVRFYKEEEEN 126

HSP 2 Score: 51.2174 bits (121), Expect = 1.212e-42
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 3 
Query:  501 FAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            FA +L+   D++VNDAFG+AHRAHA T GVA +L P+V G
Sbjct:  130 FAMQLSKSGDIFVNDAFGTAHRAHASTSGVASYL-PAVGG 168
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.579e-42
Identity = 63/124 (50.81%), Postives = 87/124 (70.16%), Query Frame = 2 
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            L +  ++GKR+ +RVD NVPL+D   ITDD R+  A+P+I+ ++ +G ++IL SHLGRPKG V P +SL P+  +LSEL+   V MA DCIG EV +    + +G V+LLEN+RFH EEE N P
Sbjct:    6 LSDITIQGKRILMRVDFNVPLNDEREITDDKRIVEALPSIRKILDNGGRLILMSHLGRPKGKVNPIFSLAPVAAKLSELIDTPVAMAEDCIGTEVMQSALALQDGEVMLLENLRFHPEEEANDP 129

HSP 2 Score: 62.7734 bits (151), Expect = 1.579e-42
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 3 
Query:  492 DLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            D EFAK+LA+L ++YVNDAFG+AHRAHA TEG+  F+  +VAG
Sbjct:  128 DPEFAKELAALGEMYVNDAFGTAHRAHASTEGITHFVPTAVAG 170
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.681e-42
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 2 
Query:  140 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            DL+ K VF+RVD NVP DDN NIT+D R+  AVPTIKY + +GAKVIL+SHLGRPKG   PKY++ P   RLSELLG EVK A DC G +V+ MVA +  G VL+LENVRF+  EEKN P
Sbjct:   11 DLREKLVFIRVDFNVPQDDNGNITEDTRIVGAVPTIKYAIENGAKVILASHLGRPKGEKKPKYTMAPAARRLSELLGKEVKQATDCFGPDVDAMVAALQPGDVLMLENVRFYPGEEKNDP 130

HSP 2 Score: 43.1282 bits (100), Expect = 2.681e-42
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + D +FA KLA+  ++YVNDAF  +HRAHA    + K +    AG
Sbjct:  125 EEKNDPDFACKLANGCEIYVNDAFAVSHRAHASVHAITKCIPVIAAG 171
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.681e-42
Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 2 
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNG 493
            +++  +KGK+V VR D NVPL D + ITD+NR+  A+PTIKYL+ +GAKVIL SH+G+PKG   P++SL P+  RLSE+LG EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KNG
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNG 131

HSP 2 Score: 60.077 bits (144), Expect = 2.681e-42
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 3 
Query:  498 EFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            E +K+LASLA+++VNDAFG+AHRAH  T GV ++LKP+V G
Sbjct:  133 ELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCG 173
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.681e-42
Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 2 
Query:  128 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNG 493
            +++  +KGK+V VR D NVPL D + ITD+NR+  A+PTIKYL+ +GAKVIL SH+G+PKG   P++SL P+  RLSE+LG EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KNG
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNG 131

HSP 2 Score: 60.077 bits (144), Expect = 2.681e-42
Identity = 26/41 (63.41%), Postives = 35/41 (85.37%), Query Frame = 3 
Query:  498 EFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            E +K+LASLA+++VNDAFG+AHRAH  T GV ++LKP+V G
Sbjct:  133 ELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCG 173
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_CHLT3 (Phosphoglycerate kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.681e-42
Identity = 71/130 (54.62%), Postives = 89/130 (68.46%), Query Frame = 2 
Query:  110 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNGP 496
            KK+V    +    GKRV +RVD NVPL D   +TDD R+R A+P+I+ ++  G  VIL SHLGRPKG    + SLKP   RL+ELLG  V+MA DCIG+EV+ M A +  G VL+LEN+RFHKEEE N P
Sbjct:    3 KKTVD---DVSFAGKRVLMRVDFNVPLKDGA-VTDDIRIRGALPSIQKVLSDGGCVILMSHLGRPKGKPVAEMSLKPAADRLAELLGKPVQMAPDCIGDEVKNMAAAMKAGDVLMLENLRFHKEEEANDP 128

HSP 2 Score: 62.3882 bits (150), Expect = 2.681e-42
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 3 
Query:  492 DLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            D EFAK LASL +++VNDAFG+AHRAHA TEGV  ++  SVAG
Sbjct:  127 DPEFAKSLASLGEVFVNDAFGTAHRAHASTEGVTNYVAESVAG 169
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.681e-42
Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = 2 
Query:  110 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            KKS+   ++ DLKGKRVF RVD NVP+ +   ITD+ R+RAA+PTI+YL+  GAKVIL+SHLGRPKG    +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKN
Sbjct:    3 KKSI---RDVDLKGKRVFCRVDFNVPMKEG-KITDETRIRAALPTIQYLIEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKN 126

HSP 2 Score: 58.5362 bits (140), Expect = 2.681e-42
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + D E AK+ A+LAD++VNDAFG+AHRAHA T G+A +L P+V+G
Sbjct:  123 EEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSG 168
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.681e-42
Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = 2 
Query:  110 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            KKS+   ++ DLKGKRVF RVD NVP+ +   ITD+ R+RAA+PTI+YL+  GAKVIL+SHLGRPKG    +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKN
Sbjct:    3 KKSI---RDVDLKGKRVFCRVDFNVPMKEG-KITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKN 126

HSP 2 Score: 58.5362 bits (140), Expect = 2.681e-42
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + D E AK+ A+LAD++VNDAFG+AHRAHA T G+A +L P+V+G
Sbjct:  123 EEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSG 168
[Close]
BLAST of GO241578 vs. ExPASy Swiss-Prot
Match: PGK_BACC3 (Phosphoglycerate kinase OS=Bacillus cereus (strain 03BB102) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.681e-42
Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = 2 
Query:  110 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKN 490
            KKS+   ++ DLKGKRVF RVD NVP+ +   ITD+ R+RAA+PTI+YL+  GAKVIL+SHLGRPKG    +  L P+  RL ELLG +VK A++  G   ++MVA + EG VL+LENVRF+  EEKN
Sbjct:    3 KKSI---RDVDLKGKRVFCRVDFNVPMKEG-KITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEMVAAMNEGDVLVLENVRFYAGEEKN 126

HSP 2 Score: 58.5362 bits (140), Expect = 2.681e-42
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:  480 KRRMDLEFAKKLASLADLYVNDAFGSAHRAHAXTEGVAKFLKPSVAG 620
            + + D E AK+ A+LAD++VNDAFG+AHRAHA T G+A +L P+V+G
Sbjct:  123 EEKNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSG 168
The following BLAST results are available for this feature:
BLAST of GO241578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_HYDS01.212e-4257.50Phosphoglycerate kinase OS=Hydrogenobaculum sp. (s... [more]
PGK_BORDL1.212e-4257.94Phosphoglycerate kinase OS=Borrelia duttonii (stra... [more]
PGK_PROVI1.579e-4250.81Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_GEOSF2.681e-4263.33Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]
PGK_CLOPE2.681e-4254.40Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP12.681e-4254.40Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CHLT32.681e-4254.62Phosphoglycerate kinase OS=Chloroherpeton thalassi... [more]
PGK_BACWK2.681e-4256.25Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]
PGK_BACHK2.681e-4256.25Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACC32.681e-4256.25Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank description226 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 342 5, mRNA sequence.