GO241538

Overview
NameGO241538
Unique NameGO241538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13737 contig Csv1_Contig13737:1..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.039e-47
Identity = 85/130 (65.38%), Postives = 99/130 (76.15%), Query Frame = 3
Query:  123 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            YDP+PLQD CVA N   + VFVNGKFCKDPKL    DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I+LVL+G L VGFV+S+  N TL SK L  GD F
Sbjct:   25 YDPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVF 153          

HSP 2 Score: 36.1946 bits (82), Expect = 1.039e-47
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +F FPIGL+ F  N GKT+AVA   + SQ
Sbjct:  152 VFAFPIGLVQFHANTGKTHAVAIGVVGSQ 180          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.916e-46
Identity = 84/152 (55.26%), Postives = 96/152 (63.16%), Query Frame = 3
Query:   57 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            MK+  FL   ++           DPS LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRASE+L V  GTL VGFVTS+   N L SK L +GD F
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVF 151          

HSP 2 Score: 42.743 bits (99), Expect = 1.916e-46
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLIHFQ N+GK  AVA++ L+SQ
Sbjct:  150 VFVFPQGLIHFQVNVGKYPAVAFAGLSSQ 178          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.223e-45
Identity = 80/130 (61.54%), Postives = 93/130 (71.54%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            DPSPLQD C+ +N P + +FVNGKFCKDPKL   +DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EILLV EGTL VGF +S    N L +K LNKGD F
Sbjct:   26 DPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVF 154          

HSP 2 Score: 43.8986 bits (102), Expect = 1.223e-45
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLIHFQ NIGK  AVA+++L+SQ
Sbjct:  153 VFVFPEGLIHFQVNIGKQPAVAFASLSSQ 181          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.018e-44
Identity = 82/154 (53.25%), Postives = 99/154 (64.29%), Query Frame = 3
Query:   51 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            + MK++ FL   ++           DPS LQD CV+ N   +GVFVNGKFCKDPKL   +DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EIL+V +GTL VGFVTS+  +N L SK LN+GD F
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVF 153          

HSP 2 Score: 45.0542 bits (105), Expect = 1.018e-44
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLIHFQ NIGK  AVA++AL+SQ
Sbjct:  152 VFVFPEGLIHFQANIGKAPAVAFAALSSQ 180          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.728e-44
Identity = 83/130 (63.85%), Postives = 94/130 (72.31%), Query Frame = 3
Query:  123 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            YDPSPLQD CVA+   K+GVFVNG+FCKDPKL   +DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G  PPHIHPRASEI+LV++G L VGFV+S+  N TL SK L  GD F
Sbjct:   25 YDPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVF 150          

HSP 2 Score: 40.4318 bits (93), Expect = 1.728e-44
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FV PIGL+ F  NIGKTNAVA  A+ SQ
Sbjct:  149 VFVHPIGLVQFHANIGKTNAVAIGAVGSQ 177          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.934e-44
Identity = 75/131 (57.25%), Postives = 90/131 (68.70%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKALNKGDAF 512
            DP+ LQD CV +N P DG+FVNG FCKDP    P+DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+ +VLEGT +VGFVTS+  +  N L +K LNKGD F
Sbjct:   24 DPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVF 154          

HSP 2 Score: 38.1206 bits (87), Expect = 2.934e-44
Identity = 18/29 (62.07%), Postives = 20/29 (68.97%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLIHFQ NIG    V  S L+SQ
Sbjct:  153 VFVFPQGLIHFQLNIGNYPGVGISGLSSQ 181          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.438e-43
Identity = 80/154 (51.95%), Postives = 98/154 (63.64%), Query Frame = 3
Query:   51 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            + MK++ FL   ++           DPS LQD CV+ N+  +GVFVNGKFCKDPKL   +DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EIL+V  GTL VGFVTS+  +N L +K LN+GD F
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVF 153          

HSP 2 Score: 45.0542 bits (105), Expect = 1.438e-43
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLIHFQ NIGK  AVA++AL+SQ
Sbjct:  152 VFVFPEGLIHFQANIGKAPAVAFAALSSQ 180          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.183e-43
Identity = 81/129 (62.79%), Postives = 90/129 (69.77%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            DPS LQD CVA  +    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EIL +LEG+L+VGFVTS+   N L +K LNKGD F
Sbjct:   23 DPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVF 148          

HSP 2 Score: 41.2022 bits (95), Expect = 3.183e-43
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLIHFQFN G  + +A +AL+SQ
Sbjct:  147 VFVFPQGLIHFQFNYGTKDVIALAALSSQ 175          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.172e-43
Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 3
Query:  123 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            YDP+PLQD CVA +   + VFVNGKFCKDPK     DF +SGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPRA+EIL+V +G L VGFV+S+Q NN L  K L +GD F
Sbjct:   26 YDPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVF 154          

HSP 2 Score: 42.3578 bits (98), Expect = 9.172e-43
Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFPIGLIHFQ N+ +T AVA++   SQ
Sbjct:  153 VFVFPIGLIHFQMNVRRTRAVAFAGFGSQ 181          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.646e-42
Identity = 75/130 (57.69%), Postives = 92/130 (70.77%), Query Frame = 3
Query:  123 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            Y+PSPLQD CVA N   +GV+VNGKFCKDPK     DF+ SGL  PGNT+   GV  T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEI LV++G L VGFV+S++ N TL +K L  GD F
Sbjct:   25 YEPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVF 153          

HSP 2 Score: 38.891 bits (89), Expect = 2.646e-42
Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GLI F  NIGKTNAV  +A  SQ
Sbjct:  152 VFVFPKGLIQFHANIGKTNAVVIAATGSQ 180          
The following BLAST results are available for this feature:
BLAST of GO241538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL12_ARATH1.039e-4765.38Putative germin-like protein subfamily 1 member 2 ... [more]
GL19_ARATH1.916e-4655.26Putative germin-like protein subfamily 1 member 9 ... [more]
GL112_ARATH1.223e-4561.54Putative germin-like protein subfamily 1 member 12... [more]
GL111_ARATH1.018e-4453.25Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL13_ARATH1.728e-4463.85Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GLP1_MESCR2.934e-4457.25Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL110_ARATH1.438e-4351.95Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL21_ORYSJ3.183e-4362.79Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL16_ARATH9.172e-4358.46Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL15_ARATH2.646e-4257.69Germin-like protein subfamily 1 member 5 OS=Arabid... [more]

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Properties
Property NameValue
Genbank description186 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 298 5, mRNA sequence.