GO241538

Overview
NameGO241538
Unique NameGO241538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13737 contig Csv1_Contig13737:1..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.674e-24
Identity = 67/158 (42.41%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            +P PLQD CVA  + K  V VNG  CK    A  +  F S L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L S+ +  G+ F +      F     K + S +  F S  P
Sbjct:   25 NPHPLQDFCVADLDGK-AVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSP 181          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.552e-24
Identity = 59/123 (47.97%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  138 LQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGD 506
            +QD CVA     DG    G  CK P      DF +SGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP ASE+LLV++GT+  GFV SD   NT   K L KGD
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGD 137          

HSP 2 Score: 32.3426 bits (72), Expect = 3.552e-24
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTS 591
            + VFP GL+HFQ N G T A+A+ + +S
Sbjct:  138 IMVFPQGLLHFQVNGGGTPALAFPSFSS 165          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.360e-24
Identity = 66/158 (41.77%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            DP PLQD CVA  + K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L S+ +  G+ F +      F     K + S +  F S  P
Sbjct:   25 DPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNP 181          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.417e-23
Identity = 65/158 (41.14%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            DP PLQD CVA  + K  V VNG  CK    A  +  F S L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L S+ +  G+ F +      F     K + S +  F S  P
Sbjct:   25 DPDPLQDFCVADLDGK-AVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNP 181          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.239e-23
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKF----CKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCV 518
            DP P+QD CVA+  P+ G   +  +    CK       +DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E++ V+ G + VGFV++        SK + +G+ F +
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAI 165          

HSP 2 Score: 30.4166 bits (67), Expect = 2.239e-23
Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = 1
Query:  511 FVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            F  P GL+HFQ+N G  +A A +   SQ
Sbjct:  163 FAIPRGLMHFQYNPGNASARAMTVFNSQ 190          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.800e-23
Identity = 59/123 (47.97%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  138 LQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGD 506
            +QD CVA     +G    G  CK P   K  DF FSGLG  GNT+N +    T A V Q PG+N LGIS  R+D A  G  P H HP ASE+L+V +GT+  GFV SD   NT   + L KGD
Sbjct:   25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD---NTPYLQTLEKGD 142          

HSP 2 Score: 31.187 bits (69), Expect = 3.800e-23
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTS 591
            + VFP GL+HFQ N G+  A+A+++  S
Sbjct:  143 IMVFPQGLLHFQVNGGEAPALAFASFGS 170          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.123e-22
Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 3
Query:  138 LQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDA 509
            +QD CVA  +PK     +G  CK+P      DF F+GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP ASE+L+V++GT+  GF++S    N +  K LN+GD+
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDS 140          

HSP 2 Score: 32.3426 bits (72), Expect = 3.123e-22
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  514 VFPIGLIHFQFNIGKTNAVAYSALTS 591
            VFP GL+HFQ N GK  A+A+ A  S
Sbjct:  142 VFPQGLLHFQLNSGKGPALAFVAFGS 167          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.064e-22
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = 3
Query:  138 LQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDA 509
            +QD CVA  +PK     +G  CK+P      DF FSGLGK GNT+N +    T A      GLN L +S  R+D A  G  P H HP ASE+L+V++GT+  GF++S    N +  K L++GD+
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDS 140          

HSP 2 Score: 32.3426 bits (72), Expect = 4.064e-22
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  514 VFPIGLIHFQFNIGKTNAVAYSALTS 591
            VFP GL+HFQ N GK  A+A+ A  S
Sbjct:  142 VFPQGLLHFQLNSGKGPALAFVAFGS 167          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22
Identity = 64/158 (40.51%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCS--CLFCSHKP 593
            D  PLQDICVA  + +    V+G  CK       +DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE++LVL G + VGF T+    N L SK + + + F V      F +       S   +F S  P
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSP 182          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.262e-21
Identity = 61/159 (38.36%), Postives = 85/159 (53.46%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            D  PLQD CVA  + K  V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  + N   SK +  G+ F +      F     K + + +  F S  P
Sbjct:   30 DADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNP 186          
The following BLAST results are available for this feature:
BLAST of GO241538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GER3_WHEAT1.674e-2442.41Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
AB19A_PRUPE3.552e-2447.97Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GER2_WHEAT6.360e-2441.77Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU1.417e-2341.14Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GL37_ORYSJ2.239e-2339.26Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
ABP20_PRUPE3.800e-2347.97Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL33_ARATH3.123e-2241.94Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL4.064e-2242.74Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL12_ORYSJ4.558e-2240.51Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ2.262e-2138.36Putative germin-like protein 3-4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank description186 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 298 5, mRNA sequence.