GO241538

Overview
NameGO241538
Unique NameGO241538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            D  PLQD CVA  N +  V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   SK +  G+ F +      F     K + + +  F S  P
Sbjct:   28 DADPLQDFCVADLNSE--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNP 184          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            D  PLQD CVA  + K  V VNG  CK    A  E  F S +   G+  AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   SK +  G+ F +      F     K + + +  F S  P
Sbjct:   30 DADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNP 186          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.633e-21
Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 3
Query:  126 DPSPLQDICVA--INNP-KDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGD 506
            DP P+QD C+   + +P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++G ++ GFV S   NN + +K + +G+
Sbjct:   26 DPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGE 151          

HSP 2 Score: 33.113 bits (74), Expect = 5.633e-21
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            + V+P GL+HFQ N+G   A     L SQ
Sbjct:  152 MMVYPKGLVHFQMNVGDVTATIVGGLNSQ 180          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.267e-20
Identity = 62/159 (38.99%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL--FCSHKP 593
            DP PLQD CVA  + +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   S+ +  G+ F +      F     K + + +  F S  P
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNP 184          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.720e-19
Identity = 49/129 (37.98%), Postives = 62/129 (48.06%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            D  PLQD+C      +  +F+NG FCK P      DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE++ V  G++  GF  +      L  K L +GD F
Sbjct:   24 DSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVF 149          

HSP 2 Score: 31.9574 bits (71), Expect = 1.720e-19
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +F+FP GL+HF  N G   A  +S L SQ
Sbjct:  148 VFIFPRGLVHFIMNYGFGLATTFSVLNSQ 176          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.241e-19
Identity = 49/129 (37.98%), Postives = 67/129 (51.94%), Query Frame = 3
Query:  126 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAF 512
            D   +QD C      +   F+NG  CK+P     +DF  + L + G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR+SE+L V++G +  GFV +   NN +    L KGD F
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVF 144          

HSP 2 Score: 28.4906 bits (62), Expect = 2.241e-19
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            +FVFP GL+HF  + G   A A+S   SQ
Sbjct:  143 VFVFPKGLLHFCLSGGFEPATAFSFYNSQ 171          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 3
Query:  132 SPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL 575
            +P QD CVA  + +     +G  CK    +  EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+EG++ VGF+T+   N TL SK +  GD F +      +     K +C  L
Sbjct:   38 NPFQDFCVA--DLQATPTNSGYPCKSQVTS--EDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLL 178          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19
Identity = 60/146 (41.10%), Postives = 72/146 (49.32%), Query Frame = 3
Query:  138 LQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGDAFCVSNWFDSFPIQHWKNKCSCL 575
            +QD CVA  N K      G  C  P   K  DF FSGLG PGNT N +    T A   Q PGLN LG+S  R+D AP G  P H HP ASE+L VL G++  GFV+S    N +  + L  G           F I   K+  S +
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAV 159          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.829e-18
Identity = 49/131 (37.40%), Postives = 63/131 (48.09%), Query Frame = 3
Query:  126 DPSPLQDICV---AINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGD 506
            DP  +QD CV       P +   +    C+ P      DF FSG+   GN +   G         Q PGL+TLG+S  R D  A  G  PPH HPRA+E  LVL G ++ GFV S      L +K L +G+
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGE 151          

HSP 2 Score: 34.2686 bits (77), Expect = 1.829e-18
Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGKTNAVAYSALTSQ 594
            + VFP  ++HFQ N+G T A  Y A  S+
Sbjct:  152 VMVFPRAMVHFQLNVGDTPATVYGAFNSE 180          
BLAST of GO241538 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.383e-18
Identity = 54/123 (43.90%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  138 LQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKALNKGD 506
            + D CVA N P      +G  CK+       DF +SGL KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP ASEIL V+EGT+   F++S    N +  KAL  GD
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGD 142          

HSP 2 Score: 20.4014 bits (41), Expect = 2.383e-18
Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 1
Query:  508 LFVFPIGLIHFQFNIGK 558
            + VFP GL+ FQ   GK
Sbjct:  143 VMVFPQGLLDFQEITGK 159          
The following BLAST results are available for this feature:
BLAST of GO241538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL35_ORYSJ3.859e-2138.36Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL36_ORYSJ5.040e-2138.36Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH5.633e-2139.23Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL33_ORYSJ3.267e-2038.99Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL111_ORYSJ1.720e-1937.98Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL34_ARATH2.241e-1937.98Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GLT3_ARATH4.717e-1939.19Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL31_ARATH4.717e-1941.10Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL24_ORYSJ1.829e-1837.40Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GLP1_IPONI2.383e-1843.90Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]

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Properties
Property NameValue
Genbank description186 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 298 5, mRNA sequence.