GO241512

Overview
NameGO241512
Unique NameGO241512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:32..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.745e-46
Identity = 100/163 (61.35%), Postives = 114/163 (69.94%), Query Frame = 3
Query:  123 MAKDTGV---AEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            M KD  +   A  G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD + +   +A  GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS  RA++Y+VAQCL     V GL KA + +Y+  YG G
Sbjct:    1 MGKDDVIESGAGGGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGV-GLVKAFQSAYFDRYGGG 162          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.683e-46
Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD   A   ++  KDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK QTD A +   +A  GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVS  RA++Y+VAQCL     V GL K  + ++Y  YG G
Sbjct:    1 MAKDIEAA--AAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGV-GLVKGFQSAFYVRYGGG 157          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.116e-46
Identity = 98/158 (62.03%), Postives = 107/158 (67.72%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD  V     +  +DY DPPP P FDA ELTKWS YRA+IAEF+A            IGYK Q+D         GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RAV+YMVAQCL     V G  KA + S+Y  YG G
Sbjct:    1 MAKD--VEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGV-GFVKAFQSSHYVNYGGG 155          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.043e-45
Identity = 93/158 (58.86%), Postives = 104/158 (65.82%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD        +  +DY DPPP P  D  EL KWSFYRA+IAEF+A            IGYK Q+D         GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RA++Y++AQCL     V G  KA + SYY  YG G
Sbjct:    1 MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGV-GFVKAFQSSYYTRYGGG 157          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.967e-44
Identity = 96/158 (60.76%), Postives = 105/158 (66.46%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            M KD  + E  S S KDY DPPP   F+  EL KWSFYRA+IAEFIA            IG+KSQTD        A VG+LGI+WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLA KVS  RAV YMVAQCL     V GL K  + +YY  YG G
Sbjct:    1 MTKDE-LTEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGV-GLVKVFQSTYYNRYGGG 156          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.175e-43
Identity = 94/160 (58.75%), Postives = 106/160 (66.25%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            M K+  V+   +  A+DY DPPP PL D  EL KWS YRALIAEF+A            IGYK QTD A N   +A  GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARKVS  RA++YM AQCL     V  L K  + S Y  YG G
Sbjct:    1 MGKEVDVSTLEAGGARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGV-ALVKGFQSSLYDRYGGG 159          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.710e-43
Identity = 93/160 (58.13%), Postives = 108/160 (67.50%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            M K+  V   G    +DY DPPP PL D  EL +WS YRA+IAEF+A            IGYK QTD + + D +A  GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RA++Y+VAQCL     V  L K  + S+Y  YG G
Sbjct:    1 MGKEADVEAGG---VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGV-ALVKGFQSSFYDRYGGG 156          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.266e-43
Identity = 96/155 (61.94%), Postives = 103/155 (66.45%), Query Frame = 3
Query:  141 VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXGXXT 605
            V+E G +  KDY DPPP PL D  EL  WSFYRA+IAEFIA            IG+K+QT P        GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS  RAV YMVAQCL     V GL KA   + Y   G G  T
Sbjct:    5 VSEEGRHG-KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPC------GGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGV-GLVKAFMMTPYKRLGGGANT 151          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 3.141e-42
Identity = 95/156 (60.90%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  141 VAEHG-SYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXGXXT 605
            V+E G ++  KDY DPPP PL D  EL  WSFYRALIAEFIA            IG+K QT P        GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS  RA+ YM+AQCL     V G  KA  K+ Y   G G  T
Sbjct:    5 VSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCD------GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGV-GFVKAFMKTPYNTLGGGANT 153          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.358e-42
Identity = 91/157 (57.96%), Postives = 102/157 (64.97%), Query Frame = 3
Query:  132 DTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            D    E G    +DY DPPP PL D  EL KWS YRA+IAEF+A            IGYK QTD + +   +A  GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RA++YM AQ L     V  L K  +  +Y  YG G
Sbjct:    6 DVSTLEAGGVRDRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGV-ALVKGFQSGFYARYGGG 161          
The following BLAST results are available for this feature:
BLAST of GO241512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PIP21_MAIZE2.745e-4661.35Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP25_MAIZE4.683e-4660.63Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP23_ARATH6.116e-4662.03Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP21_ARATH1.043e-4558.86Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP26_ARATH1.967e-4460.76Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP24_ORYSJ2.175e-4358.75Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ORYSJ3.710e-4358.13Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP28_ARATH8.266e-4361.94Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH3.141e-4260.90Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP26_MAIZE5.358e-4257.96Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank description160 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 268 5, mRNA sequence.