GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.765e-62
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK DL  RR
Sbjct:    1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.765e-62
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK DL  RR
Sbjct:    1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.765e-62
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK DL  RR
Sbjct:    1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.061e-61
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLT+GVEFGARMITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK DL  RR
Sbjct:    1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.811e-61
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQH+++NM IMLIGNK DL  RR
Sbjct:    1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.811e-61
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQH+++NM IMLIGNK DL  RR
Sbjct:    1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 1.224e-49
Identity = 88/133 (66.17%), Postives = 103/133 (77.44%), Query Frame = 1
Query:  145 TNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            T  +Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I +  + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR   N N  I+LIGNK DL  +R   Y
Sbjct:    4 TPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136          

HSP 2 Score: 36.5798 bits (83), Expect = 1.224e-49
Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE +QFA+E+GL+F+EASAKT
Sbjct:  134 VTYEEAKQFAEENGLLFLEASAKT 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 1.224e-49
Identity = 88/133 (66.17%), Postives = 103/133 (77.44%), Query Frame = 1
Query:  145 TNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            T  +Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I +  + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR   N N  I+LIGNK DL  +R   Y
Sbjct:    4 TPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136          

HSP 2 Score: 36.5798 bits (83), Expect = 1.224e-49
Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE +QFA+E+GL+F+EASAKT
Sbjct:  134 VTYEEAKQFAEENGLLFLEASAKT 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 2.080e-49
Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            +Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I +  + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR   N N  I+LIGNK DL  +R   Y
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136          

HSP 2 Score: 36.5798 bits (83), Expect = 2.080e-49
Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE +QFA+E+GL+F+EASAKT
Sbjct:  134 VTYEEAKQFAEENGLLFLEASAKT 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 2.080e-49
Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            +Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I +  + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR   N N  I+LIGNK DL  +R   Y
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136          

HSP 2 Score: 36.5798 bits (83), Expect = 2.080e-49
Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE +QFA+E+GL+F+EASAKT
Sbjct:  134 VTYEEAKQFAEENGLLFLEASAKT 157          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB2A_HUMAN4.765e-6290.55Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2... [more]
RAB2A_CHICK4.765e-6290.55Ras-related protein Rab-2A OS=Gallus gallus GN=RAB... [more]
RAB2A_CANFA4.765e-6290.55Ras-related protein Rab-2A OS=Canis familiaris GN=... [more]
RAB2A_RAT1.061e-6189.76Ras-related protein Rab-2A OS=Rattus norvegicus GN... [more]
RAB2B_MOUSE1.811e-6189.76Ras-related protein Rab-2B OS=Mus musculus GN=Rab2... [more]
RAB2B_HUMAN1.811e-6189.76Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2... [more]
RAB14_RAT1.224e-4966.17Ras-related protein Rab-14 OS=Rattus norvegicus GN... [more]
RAB14_PIG1.224e-4966.17Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 ... [more]
RAB14_PONAB2.080e-4966.92Ras-related protein Rab-14 OS=Pongo abelii GN=RAB1... [more]
RAB14_MOUSE2.080e-4966.92Ras-related protein Rab-14 OS=Mus musculus GN=Rab1... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.