GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.210e-35
Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y  LFK ++IGD+GVGK+C+L +F+D  F      TIG++   + + +  K IKLQIWDTAGQE F +IT SYYRGA G +LVYDIT  ++F +++ WL +  +HAN ++  ML+GNKCD+  +R
Sbjct:    5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKR 130          

HSP 2 Score: 30.0314 bits (66), Expect = 2.210e-35
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            V   +GEQ A+EHG+ F E SAK
Sbjct:  132 VPKAKGEQIAREHGIRFFETSAK 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.229e-35
Identity = 68/128 (53.12%), Postives = 95/128 (74.22%), Query Frame = 1
Query:  148 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            N  Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R I +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T   +FN++  W+++ +++A  ++T +L+GNKCDL  ++
Sbjct:    2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKK 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.877e-35
Identity = 59/126 (46.83%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+ K IKLQ+WDTAGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  +++A+A +  +L+GNKCD+  +R
Sbjct:    4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129          

HSP 2 Score: 28.4906 bits (62), Expect = 2.877e-35
Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+ ++ A+EHG+ F E SAK+
Sbjct:  131 VQKEQADKLAREHGIRFFETSAKS 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.877e-35
Identity = 59/126 (46.83%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+ K IKLQ+WDTAGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  +++A+A +  +L+GNKCD+  +R
Sbjct:    4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129          

HSP 2 Score: 28.4906 bits (62), Expect = 2.877e-35
Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+ ++ A+EHG+ F E SAK+
Sbjct:  131 VQKEQADKLAREHGIRFFETSAKS 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.878e-35
Identity = 63/126 (50.00%), Postives = 90/126 (71.43%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y  LFK ++IGD+GVGK+C+L +F+D  F      TIG++F  + + +  K IKLQIWDTAGQE F +IT SYYRGA G +LVYDIT  ++F +++ WL +  +HAN ++  ML+GNKCD+  +R
Sbjct:    5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKR 130          

HSP 2 Score: 27.7202 bits (60), Expect = 2.878e-35
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            V   +GEQ A+EH + F E SAK
Sbjct:  132 VLKSKGEQIAREHAIRFFETSAK 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.872e-35
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDL 519
            + YLFK++IIG+ G GK+C+L ++T+++F P    TIG EFG+R+I++D   +K+QIWDTAGQE FRS+ RSYY  A G LLVYDIT R +F  +  WL DAR  A   + ++L+GNK DL
Sbjct:    6 FDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDL 126          

HSP 2 Score: 26.9498 bits (58), Expect = 4.872e-35
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAKT 607
            +G V+  E   FA+E+GL F+E SA T
Sbjct:  130 DGQVTHWEANTFAQENGLQFIETSALT 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.874e-35
Identity = 65/124 (52.42%), Postives = 87/124 (70.16%), Query Frame = 1
Query:  163 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            YLFK ++IGD+ VGKS LL ++    F      TIGVEF  + + I+ K +K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF  +  WL++ + H++  +  ML+GNKCDL + RA
Sbjct:   11 YLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRA 134          

HSP 2 Score: 29.261 bits (64), Expect = 4.874e-35
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            VS EEG+  A+E GL F+E SA
Sbjct:  135 VSVEEGKALAEEEGLFFVETSA 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.876e-35
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y YL+K ++IGD+GVGKS LL +FT   F      TIGVEF  R I  + K IK Q+WDTAGQE +R+IT +YYRGA GALLVYDI ++ T+  +  W+ + R++A+ N+ IML+GNK DL H R
Sbjct:   10 YDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLR 134          

HSP 2 Score: 28.1054 bits (61), Expect = 4.876e-35
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            VST+E ++F+++H L F+E SA
Sbjct:  136 VSTDEAKEFSEKHKLTFIETSA 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.965e-35
Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = 1
Query:  139 NQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            ++++  Y  L K ++IGD+GVGKSC+LL+F D RF   +  TIGV+F  R I +D K IKLQIWDTAGQE F++IT SYYRGA G ++VYDIT  ++FN +  WL D  + A+ ++  +++GNKCDL  +RA ++
Sbjct:   24 SESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDF 158          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 6.346e-35
Identity = 69/126 (54.76%), Postives = 89/126 (70.63%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y  LFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + ID K IK QIWDTAGQE +R+IT +YYRGA GAL+VYDI++  ++ +   WL + R++A+ N+ + LIGNK DLAH RA
Sbjct:   10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRA 135          

HSP 2 Score: 26.5646 bits (57), Expect = 6.346e-35
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V TEE + FA+E+ L+F E SA
Sbjct:  136 VPTEESKTFAQENQLLFTETSA 157          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB10_CHICK2.210e-3549.21Ras-related protein Rab-10 OS=Gallus gallus GN=RAB... [more]
RAB1B_DICDI2.229e-3553.13Ras-related protein Rab-1B OS=Dictyostelium discoi... [more]
RAB13_HUMAN2.877e-3546.83Ras-related protein Rab-13 OS=Homo sapiens GN=RAB1... [more]
RAB13_BOVIN2.877e-3546.83Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 ... [more]
RAB10_DISOM2.878e-3550.00Ras-related protein Rab-10 OS=Discopyge ommata PE=... [more]
RAB4A_ECHMU4.872e-3552.89Probable Ras-related protein Rab-4A OS=Echinococcu... [more]
ARA1_ARATH4.874e-3552.42Ras-related protein ARA-1 OS=Arabidopsis thaliana ... [more]
RB11A_DICDI4.876e-3553.60Ras-related protein Rab-11A OS=Dictyostelium disco... [more]
RAB1C_DICDI4.965e-3550.37Ras-related protein Rab-1C OS=Dictyostelium discoi... [more]
YPT31_YEAST6.346e-3554.76GTP-binding protein YPT31/YPT8 OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.