GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.359e-35
Identity = 59/126 (46.83%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+ K IKLQ+WDTAGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  +++A+A +  +L+GNKCD+  +R
Sbjct:    4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129          

HSP 2 Score: 27.7202 bits (60), Expect = 6.359e-35
Identity = 11/24 (45.83%), Postives = 17/24 (70.83%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+ ++ A+EHG+ F E SAK+
Sbjct:  131 VLKEQADKLAREHGIRFFETSAKS 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.485e-35
Identity = 67/132 (50.76%), Postives = 93/132 (70.45%), Query Frame = 1
Query:  148 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            N  Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R I +D K +KLQIWDTAGQE FR+IT SYYRGA G  +VYD+T  ++FN++  WL++  ++A   +  +L+GNK D+  ++  EY
Sbjct:    2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEY 133          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.485e-35
Identity = 68/131 (51.91%), Postives = 95/131 (72.52%), Query Frame = 1
Query:  148 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACE 540
            N  Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R I +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T RE++ ++  WL++  ++A+ N+  +L+GNK DL  ++  +
Sbjct:    2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVD 132          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.079e-34
Identity = 59/126 (46.83%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+ K IKLQ+WDTAGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  +++A+A +  +L+GNKCD+  +R
Sbjct:    4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129          

HSP 2 Score: 26.5646 bits (57), Expect = 1.079e-34
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+ E+ A+EH + F E SAK+
Sbjct:  131 VQREQAERLAREHRIRFFETSAKS 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.079e-34
Identity = 59/126 (46.83%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+ K IKLQ+WDTAGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  +++A+A +  +L+GNKCD+  +R
Sbjct:    4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKR 129          

HSP 2 Score: 26.5646 bits (57), Expect = 1.079e-34
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+ E+ A+EH + F E SAK+
Sbjct:  131 VQREQAEKLAREHRIRFFETSAKS 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.406e-34
Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEYG 546
            +Y  LFK ++IGD+GVGK+C+L +F+D  F      TI ++F  + + +  K IKLQIWDTAGQE F +IT SYYRGA G +LVYDIT  ++F +++ WL +  QHAN ++  ML+ NKCD+ H+R    G
Sbjct:    5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKG 135          

HSP 2 Score: 26.5646 bits (57), Expect = 1.406e-34
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  548 EGEQFAKEHGLIFMEASAK 604
            +GEQ A+EH + F E SAK
Sbjct:  136 KGEQIAREHRIRFFETSAK 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.828e-34
Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHR 528
            SY  + K ++IGD+GVGKSCLL++F + +F P    TIG++F  + + I+ K +KLQ+WDTAGQE FR+IT +YYRGA G +LVYD+T   TF ++  W +   +HAN    ++L+GNK D+  R
Sbjct:   16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 140          

HSP 2 Score: 28.1054 bits (61), Expect = 1.828e-34
Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            V+ ++GE  AKE G+ F+E+SAK
Sbjct:  142 VTADQGEALAKELGIPFIESSAK 164          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.828e-34
Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHR 528
            SY  + K ++IGD+GVGKSCLL++F + +F P    TIG++F  + + I+ K +KLQ+WDTAGQE FR+IT +YYRGA G +LVYD+T   TF ++  W +   +HAN    ++L+GNK D+  R
Sbjct:   16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMDTR 140          

HSP 2 Score: 29.261 bits (64), Expect = 1.828e-34
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            V+ E+GE  AKE GL F+E+SAK
Sbjct:  142 VTYEQGEALAKELGLPFIESSAK 164          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34
Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I ++NK IK QIWDTAGQE +R+IT +YYRGA GAL+VYDI++  ++ +   WL + R++A+ N+ + LIGNK DLAH RA
Sbjct:   10 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRA 135          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34
Identity = 67/131 (51.15%), Postives = 95/131 (72.52%), Query Frame = 1
Query:  148 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACE 540
            N  Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R I +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E++ ++  WL++  ++A+ N+  +L+GNK DL  ++  +
Sbjct:    2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVD 132          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB13_MESAU6.359e-3546.83Ras-related protein Rab-13 OS=Mesocricetus auratus... [more]
YPT1_NEUCR6.485e-3550.76GTP-binding protein ypt1 OS=Neurospora crassa GN=y... [more]
RAB1B_MACFA6.485e-3551.91Ras-related protein Rab-1B OS=Macaca fascicularis ... [more]
RAB13_RAT1.079e-3446.83Ras-related protein Rab-13 OS=Rattus norvegicus GN... [more]
RAB13_MOUSE1.079e-3446.83Ras-related protein Rab-13 OS=Mus musculus GN=Rab1... [more]
RAB10_RAT1.406e-3448.85Ras-related protein Rab-10 OS=Rattus norvegicus GN... [more]
SEC4_YEAST1.828e-3448.00Ras-related protein SEC4 OS=Saccharomyces cerevisi... [more]
SEC4_CANGA1.828e-3448.00Ras-related protein SEC4 OS=Candida glabrata GN=SE... [more]
YPT32_YEAST1.887e-3455.56GTP-binding protein YPT32/YPT11 OS=Saccharomyces c... [more]
RAB1B_PONAB1.887e-3451.15Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.