GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.633e-32
Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 1
Query:  139 NQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            N+    Y ++FK ++IG++GVGK+ LL +FT   F      TIGVEF  R + +    IK QIWDTAG E +R+IT +YYRGA GALLV+D+T+ +T+  +  WL++   HA A + +ML+GNK DL+  R
Sbjct:    3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSR 133          

HSP 2 Score: 28.8758 bits (63), Expect = 1.633e-32
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V TEE   FA+ +GL+F+E SA
Sbjct:  135 VPTEEARMFAENNGLLFLETSA 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.593e-32
Identity = 55/126 (43.65%), Postives = 89/126 (70.63%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y   FK +++GD+GVGK+CLL++F D  F     + T+G++F  +++ +D   +KLQIWDTAGQE FRS+T +YYR A   LL+YDIT +++F+++ +WL + +++A  ++ +ML+GNK D    R
Sbjct:   61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQER 186          

HSP 2 Score: 34.2686 bits (77), Expect = 3.593e-32
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAKT 607
            E  V  E+GE+ AKE+GL FME SAK+
Sbjct:  185 ERVVKREDGEKLAKEYGLPFMETSAKS 211          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.679e-32
Identity = 56/133 (42.11%), Postives = 91/133 (68.42%), Query Frame = 1
Query:  136 INQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +  T   Y   FK +++GD+GVGK+CLL++F D  F     + T+G++F  +++ +D   +KLQIWDTAGQE FRS+T +YYR A   LL+YDIT +++F+++ +WL + +++A  ++ +ML+GNK D    R
Sbjct:   57 LGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDR 189          

HSP 2 Score: 33.8834 bits (76), Expect = 4.679e-32
Identity = 15/24 (62.50%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+GE+ AKE+GL FME SA+T
Sbjct:  191 VKREDGEKLAKEYGLPFMETSART 214          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 6.117e-32
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = 1
Query:  139 NQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            N     Y ++FK ++IG++GVGK+ LL +FT   F      TIGVEF  R + +    +K QIWDTAG E +R+IT +YYRGA GALLV+D+T+ +T+  +  WL++   HA A + +ML+GNK DL+  R
Sbjct:    3 NGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 133          

HSP 2 Score: 28.8758 bits (63), Expect = 6.117e-32
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V TEE   FA+ +GL+F+E SA
Sbjct:  135 VPTEEARMFAENNGLLFLETSA 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB39A_HUMAN (Ras-related protein Rab-39A OS=Homo sapiens GN=RAB39 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 8.764e-32
Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMITID-NKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANA-NMTIMLIGNKCDLAHRR 531
            + Y F+ I+IGD+ VGKSCLL +FT  RF     P  D T+GV+F +R++ I+  K IKLQ+WDTAGQE FRSITRSYYR + G  LV+DIT R +F H+  WLE+A+ +     +  +L+G+KCDLA +R
Sbjct:    5 WIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRIVFLLVGHKCDLASQR 135          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.039e-31
Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y +LFK ++IG+ GVGK+CL+ +FT   F P    TIGV+F  + + I+ + +KLQIWDTAGQE FRSIT+SYYR A   +L YDIT  E+F  L  WL +  Q+A+  +  +L+GNK DLA RR
Sbjct:    6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130          

HSP 2 Score: 22.3274 bits (46), Expect = 1.039e-31
Identity = 8/23 (34.78%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            VS +  E+F++   + ++E SAK
Sbjct:  132 VSQQRAEEFSEAQDMYYLETSAK 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.039e-31
Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y +LFK ++IG+ GVGK+CL+ +FT   F P    TIGV+F  + + I+ + +KLQIWDTAGQE FRSIT+SYYR A   +L YDIT  E+F  L  WL +  Q+A+  +  +L+GNK DLA RR
Sbjct:    6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130          

HSP 2 Score: 22.3274 bits (46), Expect = 1.039e-31
Identity = 8/23 (34.78%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            VS +  E+F++   + ++E SAK
Sbjct:  132 VSQQRAEEFSEAQDMYYLETSAK 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.039e-31
Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y +LFK ++IG+ GVGK+CL+ +FT   F P    TIGV+F  + + I+ + +KLQIWDTAGQE FRSIT+SYYR A   +L YDIT  E+F  L  WL +  Q+A+  +  +L+GNK DLA RR
Sbjct:    6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130          

HSP 2 Score: 22.3274 bits (46), Expect = 1.039e-31
Identity = 8/23 (34.78%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            VS +  E+F++   + ++E SAK
Sbjct:  132 VSQQRAEEFSEAQDMYYLETSAK 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.351e-31
Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y  LF+ ++IGD+GVGK+CLL +FTD  F   H  TIGV+F  + I +D   +++QIWDTAGQE +++IT+ YYR A G  LVYDI+   ++ H+  W+ D  ++A   +  +LIGNK D   +R
Sbjct:    5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKR 129          

HSP 2 Score: 29.261 bits (64), Expect = 1.351e-31
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+G+Q AKE+G+ F E SA T
Sbjct:  131 VGREQGQQLAKEYGMDFYETSACT 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.351e-31
Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            Y  LF+ ++IGD+GVGK+CLL +FTD  F   H  TIGV+F  + I +D   +++QIWDTAGQE +++IT+ YYR A G  LVYDI+   ++ H+  W+ D  ++A   +  +LIGNK D   +R
Sbjct:    5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKR 129          

HSP 2 Score: 29.261 bits (64), Expect = 1.351e-31
Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V  E+G+Q AKE+G+ F E SA T
Sbjct:  131 VGREQGQQLAKEYGMDFYETSACT 154          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB25_BOVIN1.633e-3246.56Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 ... [more]
RAB26_RAT3.593e-3243.65Ras-related protein Rab-26 OS=Rattus norvegicus GN... [more]
RAB26_MOUSE4.679e-3242.11Ras-related protein Rab-26 OS=Mus musculus GN=Rab2... [more]
RAB25_RABIT6.117e-3245.80Ras-related protein Rab-25 OS=Oryctolagus cuniculu... [more]
RB39A_HUMAN8.764e-3251.91Ras-related protein Rab-39A OS=Homo sapiens GN=RAB... [more]
RAB30_MOUSE1.039e-3151.20Ras-related protein Rab-30 OS=Mus musculus GN=Rab3... [more]
RAB30_HUMAN1.039e-3151.20Ras-related protein Rab-30 OS=Homo sapiens GN=RAB3... [more]
RAB30_BOVIN1.039e-3151.20Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 ... [more]
RAB15_RAT1.351e-3145.60Ras-related protein Rab-15 OS=Rattus norvegicus GN... [more]
RAB15_MOUSE1.351e-3145.60Ras-related protein Rab-15 OS=Mus musculus GN=Rab1... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.