GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2195 contig Csv1_Contig2195:31..638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4)

HSP 1 Score: 180.259 bits (456), Expect = 2.080e-49
Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            +Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I +  + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR   N N  I+LIGNK DL  +R   Y
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136          

HSP 2 Score: 36.5798 bits (83), Expect = 2.080e-49
Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE +QFA+E+GL+F+EASAKT
Sbjct:  134 VTYEEAKQFAEENGLLFLEASAKT 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 2.080e-49
Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            +Y+Y+FKYIIIGD GVGKSCLL QFT+K+F      TIGVEFG R+I +  + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR   N N  I+LIGNK DL  +R   Y
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136          

HSP 2 Score: 36.5798 bits (83), Expect = 2.080e-49
Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE +QFA+E+GL+F+EASAKT
Sbjct:  134 VTYEEAKQFAEENGLLFLEASAKT 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 3.536e-49
Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            Y Y+FKYIIIGD GVGKSCLL QFT+ +F P    TIGVEFG R++ ++NK IKLQIWDTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL +WL DAR   N N  IMLIGNK DL  +R   Y
Sbjct:    5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTY 133          

HSP 2 Score: 33.4982 bits (75), Expect = 3.536e-49
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            V+ EE   FAK++GLIF+E+SAKT
Sbjct:  131 VTYEEASAFAKQNGLIFVESSAKT 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 9.342e-42
Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 1
Query:  139 NQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            ++ + SY +LFKYI++GD+ VGKS LLLQF DKRF P  D TIGVEFG+R I I++K IKLQIWDTAGQE FRSITR+YYRGA  A++VYDITRR++F  L SWL D R+ ++ ++T +LIGNK DL   R
Sbjct:   15 DRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANR 145          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.494e-40
Identity = 74/126 (58.73%), Postives = 97/126 (76.98%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL++FT   F      TIGVEF  R I +DNK IK QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++  WL++ R+HA++N+ IML+GNK DL H RA
Sbjct:    7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRA 132          

HSP 2 Score: 28.1054 bits (61), Expect = 1.494e-40
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            VSTEE + FA E+ L F+E SA
Sbjct:  133 VSTEEAQAFAAENNLSFIETSA 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4A_DANRE (Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.762e-40
Identity = 79/122 (64.75%), Postives = 100/122 (81.97%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDL 519
            +Y +LFK+++IG+ G GKSCLL QF +KRF+   + TIGVEFG+++I++ NK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR  A+ N+ I+L GNK DL
Sbjct:    4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 125          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40
Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK+++IG  G GKSCLL QF + +F+   + TIGVEFG+R++ +  K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR  A+ N+ ++L GNK DL   R
Sbjct:    4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40
Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK+++IG  G GKSCLL QF + +F+   + TIGVEFG+R++ +  K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR  A+ N+ ++L GNK DL   R
Sbjct:    4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40
Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK+++IG  G GKSCLL QF + +F+   + TIGVEFG+R++ +  K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR  A+ N+ ++L GNK DL   R
Sbjct:    4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40
Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y +LFK+++IG  G GKSCLL QF + +F+   + TIGVEFG+R++ +  K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR  A+ N+ ++L GNK DL   R
Sbjct:    4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB14_HUMAN2.080e-4966.92Ras-related protein Rab-14 OS=Homo sapiens GN=RAB1... [more]
RAB14_CHICK2.080e-4966.92Ras-related protein Rab-14 OS=Gallus gallus GN=RAB... [more]
RAB14_DICDI3.536e-4968.99Ras-related protein Rab-14 OS=Dictyostelium discoi... [more]
RAB2B_DICDI9.342e-4262.60Ras-related protein Rab-2B OS=Dictyostelium discoi... [more]
YPT3_SCHPO1.494e-4058.73GTP-binding protein ypt3 OS=Schizosaccharomyces po... [more]
RAB4A_DANRE1.762e-4064.75Ras-related protein Rab-4A OS=Danio rerio GN=rab4a... [more]
RAB4B_RAT6.695e-4061.11Ras-related protein Rab-4B OS=Rattus norvegicus GN... [more]
RAB4B_MOUSE6.695e-4061.11Ras-related protein Rab-4B OS=Mus musculus GN=Rab4... [more]
RAB4B_HUMAN6.695e-4061.11Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4... [more]
RAB4B_CANFA6.695e-4061.11Ras-related protein Rab-4B OS=Canis familiaris GN=... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.