GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAS1_RHIRA (Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.294e-16
Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDL 519
            S+   +K +++G  GVGKS L +QF    F   +D TI   +  + + ID++   L + DTAGQE + ++   Y R   G LLVY IT R +F  + ++ +   R        ++L+GNKCDL
Sbjct:    6 SFVREYKLVMVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDSETALLDVLDTAGQEEYSAMREQYMRNGEGFLLVYSITSRLSFEEITTFYQQICRVKDRDYFPMVLVGNKCDL 127          

HSP 2 Score: 26.5646 bits (57), Expect = 6.294e-16
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            VS++EG   AK  G  F+E SAK
Sbjct:  133 VSSQEGRDLAKNFGCQFIETSAK 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAP1_PHYPO (Ras-related protein Rap-1 OS=Physarum polycephalum GN=RAP1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.314e-16
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANA-NMTIMLIGNKCDLAHRR 531
            FK +++G  GVGKS L +QF    F   +D TI   +  + + +D +   L+I DTAG E F ++   Y +   G +LVY I    TFN L    E   +  +  ++ ++L+GNKCDLA +R
Sbjct:    6 FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY-RKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIIAMSTFNDLPDLREQILRVKDCDDVPMVLVGNKCDLAEQR 126          

HSP 2 Score: 26.5646 bits (57), Expect = 6.314e-16
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  536 VSTEEGEQFAKEH-GLIFMEASAK 604
            +STE+G++ A++  G  F+EASAK
Sbjct:  128 ISTEQGDELARKFGGCAFLEASAK 151          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_RAT (GTP-binding nuclear protein Ran OS=Rattus norvegicus GN=Ran PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_PONAB (GTP-binding nuclear protein Ran OS=Pongo abelii GN=RAN PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_MOUSE (GTP-binding nuclear protein Ran OS=Mus musculus GN=Ran PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_MACFA (GTP-binding nuclear protein Ran OS=Macaca fascicularis GN=RAN PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_HUMAN (GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +  PIK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 130          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_RHIRA6.294e-1634.96Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1... [more]
RAP1_PHYPO6.314e-1636.07Ras-related protein Rap-1 OS=Physarum polycephalum... [more]
RAN_XENTR6.742e-1633.88GTP-binding nuclear protein Ran OS=Xenopus tropica... [more]
RAN_XENLA6.742e-1633.88GTP-binding nuclear protein Ran OS=Xenopus laevis ... [more]
RAN_RAT6.742e-1633.88GTP-binding nuclear protein Ran OS=Rattus norvegic... [more]
RAN_PONAB6.742e-1633.88GTP-binding nuclear protein Ran OS=Pongo abelii GN... [more]
RAN_MOUSE6.742e-1633.88GTP-binding nuclear protein Ran OS=Mus musculus GN... [more]
RAN_MACFA6.742e-1633.88GTP-binding nuclear protein Ran OS=Macaca fascicul... [more]
RAN_HUMAN6.742e-1633.88GTP-binding nuclear protein Ran OS=Homo sapiens GN... [more]
RAN_CHICK6.742e-1633.88GTP-binding nuclear protein Ran OS=Gallus gallus G... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.