GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RASL_COPCI (24 kDa Ras-like protein OS=Coprinopsis cinerea GN=CC-RAS PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.644e-15
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDLAHRR 531
            +K +++G  GVGKS L +QF    F   +D TI   +  + I ID++   L + DTAGQE + ++   Y R   G LLVY IT R +F  ++ + +   R     +  ++++ NKCDL + R
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCI-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYER 131          

HSP 2 Score: 24.2534 bits (51), Expect = 6.644e-15
Identity = 12/26 (46.15%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAK 604
            E  V   EG   AK  G  F+E SAK
Sbjct:  130 ERQVGMNEGRDLAKHFGCKFIETSAK 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RASL_COPC7 (24 kDa Ras-like protein (Fragments) OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC-RAS PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 6.668e-15
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDLAHRR 531
            +K +++G  GVGKS L +QF    F   +D TI   +  + I ID++   L + DTAGQE + ++   Y R   G LLVY IT R +F  ++ + +   R     +  ++++ NKCDL + R
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCI-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYER 131          

HSP 2 Score: 24.2534 bits (51), Expect = 6.668e-15
Identity = 12/26 (46.15%), Postives = 13/26 (50.00%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAK 604
            E  V   EG   AK  G  F+E SAK
Sbjct:  130 ERQVGMNEGRDLAKHFGCKFIETSAK 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.677e-15
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 1
Query:  166 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDL 519
            L K +I+GD GVGKS L +Q T  +F   +D TI   +  + + ID +   L I DTAGQE + ++   Y R   G L+VY I  R +F  + ++ E   R    +   I++IGNK DL
Sbjct:    4 LLKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSY-RKQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADL 121          

HSP 2 Score: 24.2534 bits (51), Expect = 6.677e-15
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  548 EGEQFAKEHGLIFMEASAKT 607
            EG++ AK  G  F+E SAK+
Sbjct:  132 EGKELAKSFGAPFLETSAKS 151          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RBL2B_HUMAN (Rab-like protein 2B OS=Homo sapiens GN=RABL2B PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 40/115 (34.78%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  172 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 516
            K I +GD+ VGKS L+ +F    FQP    T  +       T+D + I +  WDTAGQE F+S+  SYY  A   ++V+D+ R+ T+ +L++W  + R+     +  +++ NK D
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIVVANKID 136          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_TETPY (GTP-binding nuclear protein Ran OS=Tetrahymena pyriformis PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 516
            FK +++GD GVGK+  + +     F+  +  T GV     ++      I+  IWDTAGQE    +   YY GA  A++++D+T R T+ ++  W +D  +    N+ I+L+GNK D
Sbjct:   12 FKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIGADAAIMMFDVTSRITYKNIPKWHKDLTRICE-NVPIVLVGNKVD 126          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_SALSA (GTP-binding nuclear protein Ran OS=Salmo salar GN=ran PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +   IK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_DANRE (GTP-binding nuclear protein Ran OS=Danio rerio GN=ran PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +   IK  +WDTAGQE F  +   YY  A  A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.629e-15
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1
Query:  145 TNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDLAHRR 531
            TN S   L K  I+GD GVGK+ + +QF    F   +D TI   +  + + ID++   L I DTAGQ+   ++   + R   G +LVY +T R +F+ +  + E   R     ++ IM+IGNK DL   R
Sbjct:    3 TNKSNGNLVKLCIMGDGGVGKTSVTIQFISNHFVHYYDPTIEDSYRKQCL-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDER 131          

HSP 2 Score: 26.9498 bits (58), Expect = 8.629e-15
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAKT 607
            E  V+ +EG+  A+  G+ FME SAKT
Sbjct:  130 ERQVTFQEGKDLARCLGMSFMEVSAKT 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAP2A_PONAB (Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2A PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.691e-15
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDLAHRR 531
            +K +++G  GVGKS L +QF    F   +D TI  +F  + I +D+ P  L+I DTAG E F S+   Y +   G +LVY +  +++F  +    +   R      + ++L+GNK DL   R
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESER 124          

HSP 2 Score: 28.1054 bits (61), Expect = 8.691e-15
Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAKT 607
            E  VS+ EG   A+E G  FME SAK+
Sbjct:  123 EREVSSNEGRALAEEWGCPFMETSAKS 149          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAP2A_MOUSE (Ras-related protein Rap-2a OS=Mus musculus GN=Rap2a PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.691e-15
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDLAHRR 531
            +K +++G  GVGKS L +QF    F   +D TI  +F  + I +D+ P  L+I DTAG E F S+   Y +   G +LVY +  +++F  +    +   R      + ++L+GNK DL   R
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESER 124          

HSP 2 Score: 28.1054 bits (61), Expect = 8.691e-15
Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  527 EGXVSTEEGEQFAKEHGLIFMEASAKT 607
            E  VS+ EG   A+E G  FME SAK+
Sbjct:  123 EREVSSNEGRALAEEWGCPFMETSAKS 149          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASL_COPCI6.644e-1534.4324 kDa Ras-like protein OS=Coprinopsis cinerea GN=... [more]
RASL_COPC76.668e-1534.4324 kDa Ras-like protein (Fragments) OS=Coprinopsis... [more]
RASC_DICDI6.677e-1537.82Ras-like protein rasC OS=Dictyostelium discoideum ... [more]
RBL2B_HUMAN7.454e-1534.78Rab-like protein 2B OS=Homo sapiens GN=RABL2B PE=2... [more]
RAN_TETPY7.454e-1533.62GTP-binding nuclear protein Ran OS=Tetrahymena pyr... [more]
RAN_SALSA7.454e-1533.06GTP-binding nuclear protein Ran OS=Salmo salar GN=... [more]
RAN_DANRE7.454e-1533.06GTP-binding nuclear protein Ran OS=Danio rerio GN=... [more]
RASY_DICDI8.629e-1535.38Ras-like protein rasY OS=Dictyostelium discoideum ... [more]
RAP2A_PONAB8.691e-1533.61Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2... [more]
RAP2A_MOUSE8.691e-1533.61Ras-related protein Rap-2a OS=Mus musculus GN=Rap2... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.