GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RASM_MOUSE (Ras-related protein M-Ras OS=Mus musculus GN=Mras PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE-DARQHANANMTIMLIGNKCDLAHRR 531
            +K +++GD GVGKS L +QF  K F P +D TI   +  +   IDN+   L + DTAGQE F ++   Y R   G L+VY +T + +F H+  + +   R     +  ++L+ NK DL H R
Sbjct:   14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLR 134          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14
Identity = 42/128 (32.81%), Postives = 70/128 (54.69%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGNKCDLAHRR 531
            MS A   K + +GD  VGK+C+L+ +T   F   +  T+   F A ++ +D   + L +WDTAGQE +  +    YRGA   LL + +  R ++ +++  W+ + R +A   + I+L+G K DL   R
Sbjct:    1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYA-PTVPIVLVGTKLDLREDR 126          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAC13_GOSHI (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum GN=RAC13 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14
Identity = 40/124 (32.26%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL-ASWLEDARQHANANMTIMLIGNKCDL 519
            MS A   K + +GD  VGK+C+L+ +T   F   +  T+   F A ++ +D   + L +WDTAGQE +  +    YRGA   LL + +  + ++ ++   W+ + R +A+ N+ ++L+G K DL
Sbjct:    1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIYKKWIPELRHYAH-NVPVVLVGTKLDL 122          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RERG_HUMAN (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.469e-14
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 1
Query:  172 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITR-SYYRGAAGALLVYDITRRETFNH---LASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            K  I G  GVGKS L+++F  KRF   +D T+   +     TID++ + ++I DTAGQE   +I R  + R   G +LVYDIT R +F     L + L++ ++    N+T++L+GNK DL H R
Sbjct:    8 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTY-RHQATIDDEVVSMEILDTAGQED--TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK--PKNVTLILVGNKADLDHSR 126          

HSP 2 Score: 26.9498 bits (58), Expect = 2.469e-14
Identity = 14/24 (58.33%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            VSTEEGE+ A E    F E SA T
Sbjct:  128 VSTEEGEKLATELACAFYECSACT 151          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.832e-14
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  T+GVE    +   +   I+  +WDTAGQE F  +   YY     A++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCE-NIPIVLCGNKVDVKDRK 129          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RALBA_XENLA (Ras-related protein ralB-A OS=Xenopus laevis GN=ralb-A PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.832e-14
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  148 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANAN-MTIMLIGNKCDLAHRR 531
            N S   L K I++G  GVGKS L LQF    F   ++ T    +  +++ +D + +++ I DTAGQE + +I  +Y+R   G LLV+ IT  E+F   A + E   R  A  + + ++++GNK DL  RR
Sbjct:    8 NQSSLVLHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLIVGNKSDLEDRR 136          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAC7_ORYSJ (Rac-like GTP-binding protein 7 OS=Oryza sativa subsp. japonica GN=RAC7 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.832e-14
Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = 1
Query:  151 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL-ASWLEDARQHANANMTIMLIGNKCDL 519
            MS A   K + +GD  VGK+C+L+ +T   F   +  T+   F A ++ +D   + L +WDTAGQE +  +    YRGA   LL + +  + ++ ++   W+ + R +A  N+ I+L+G K DL
Sbjct:    1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYA-PNVPIVLVGTKLDL 122          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.832e-14
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  TIGVE        +   IK  +WDTAGQE F  +   YY  A   ++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:    8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFHTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVRVCE-NIPIVLCGNKVDVKERK 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.832e-14
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  169 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            FK +++GD G GK+  + +     F+  +  TIGVE        +   IK  +WDTAGQE F  +   YY  A   ++++D+T R T+ ++ +W  D  +    N+ I+L GNK D+  R+
Sbjct:    8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVRVCE-NIPIVLCGNKVDVKERK 127          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RASV_DICDI (Ras-like protein rasV OS=Dictyostelium discoideum GN=rasV PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.190e-14
Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 1
Query:  139 NQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED-ARQHANANMTIMLIGNKCDLAHRRACEY 543
            N  N +   + +  I+GD GVGK+ +  QF    F   +D TI   +  + I + +K   L I DTAGQ+   ++   + R   G +LVY IT + +FN + ++ E   R     ++ IM+IGNK DL + R   Y
Sbjct:   24 NCNNNNKNNIVQLCIMGDGGVGKTAVTTQFISNHFVYYYDPTIEDSY-RKQICVSDKSYILDILDTAGQDELTAMRDQWIRSCEGFVLVYSITCKSSFNQVLNFREQIIRVLDRDDVPIMMIGNKSDLVNERQVTY 158          

HSP 2 Score: 26.9498 bits (58), Expect = 3.190e-14
Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  518 LLIEGXVSTEEGEQFAKEHGLIFMEASAK 604
            L+ E  V+  EG++ A+  G+ FME SAK
Sbjct:  150 LVNERQVTYHEGKELAQRLGMSFMEVSAK 178          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASM_MOUSE2.169e-1436.89Ras-related protein M-Ras OS=Mus musculus GN=Mras ... [more]
RAC2_LOTJA2.169e-1432.81Rac-like GTP-binding protein RAC2 OS=Lotus japonic... [more]
RAC13_GOSHI2.169e-1432.26Rac-like GTP-binding protein RAC13 OS=Gossypium hi... [more]
RERG_HUMAN2.469e-1439.52Ras-related and estrogen-regulated growth inhibito... [more]
RAN_CAEEL2.832e-1431.40GTP-binding nuclear protein ran-1 OS=Caenorhabditi... [more]
RALBA_XENLA2.832e-1436.15Ras-related protein ralB-A OS=Xenopus laevis GN=ra... [more]
RAC7_ORYSJ2.832e-1433.06Rac-like GTP-binding protein 7 OS=Oryza sativa sub... [more]
GSP1_CANGA2.832e-1433.06GTP-binding nuclear protein GSP1/Ran OS=Candida gl... [more]
GSP1_ASHGO2.832e-1433.06GTP-binding nuclear protein GSP1/Ran OS=Ashbya gos... [more]
RASV_DICDI3.190e-1433.09Ras-like protein rasV OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.