GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 8.547e-38
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R HA++N+ IML+GNK DL H RA
Sbjct:    8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133          

HSP 2 Score: 25.7942 bits (55), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+E   FA+++GL F+E SA
Sbjct:  134 VPTDEARAFAEKNGLSFIETSA 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 8.547e-38
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R HA++N+ IML+GNK DL H RA
Sbjct:    8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133          

HSP 2 Score: 25.7942 bits (55), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+E   FA+++GL F+E SA
Sbjct:  134 VPTDEARAFAEKNGLSFIETSA 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 8.547e-38
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R HA++N+ IML+GNK DL H RA
Sbjct:    8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133          

HSP 2 Score: 25.7942 bits (55), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+E   FA+++GL F+E SA
Sbjct:  134 VPTDEARAFAEKNGLSFIETSA 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 8.547e-38
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R HA++N+ IML+GNK DL H RA
Sbjct:    8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133          

HSP 2 Score: 25.7942 bits (55), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+E   FA+++GL F+E SA
Sbjct:  134 VPTDEARAFAEKNGLSFIETSA 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 8.547e-38
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R HA++N+ IML+GNK DL H RA
Sbjct:    8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133          

HSP 2 Score: 25.7942 bits (55), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+E   FA+++GL F+E SA
Sbjct:  134 VPTDEARAFAEKNGLSFIETSA 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 8.547e-38
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI +  T+ ++  WL++ R HA++N+ IML+GNK DL H RA
Sbjct:    8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133          

HSP 2 Score: 25.7942 bits (55), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+E   FA+++GL F+E SA
Sbjct:  134 VPTDEARAFAEKNGLSFIETSA 155          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.547e-38
Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAH 525
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TRR TF ++  WL++ + H + N+ +ML+GNK DL H
Sbjct:   10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRH 132          

HSP 2 Score: 27.335 bits (59), Expect = 8.547e-38
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V TE+G+ +A++  L FME SA
Sbjct:  136 VPTEDGKSYAEQESLCFMETSA 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.547e-38
Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAH 525
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL++ R H + N+ +ML+GNK DL H
Sbjct:   11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRH 133          

HSP 2 Score: 27.7202 bits (60), Expect = 8.547e-38
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V T+EG+ FA+   L FME SA
Sbjct:  137 VQTDEGKAFAERESLYFMETSA 158          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 8.547e-38
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAH 525
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  + + ID K IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR  TF     WL++ R H + N+ +MLIGNK DL H
Sbjct:   10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRH 132          

HSP 2 Score: 29.6462 bits (65), Expect = 8.547e-38
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            VSTE+G+ FA++  L FME SA
Sbjct:  136 VSTEDGKAFAEKESLYFMETSA 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.069e-37
Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 1
Query:  148 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACEY 543
            N  Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R I +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++  WL++  ++A+ N+  +L+GNKCDL  ++  +Y
Sbjct:    2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDY 133          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RB11A_PIG8.547e-3857.94Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11... [more]
RB11A_MOUSE8.547e-3857.94Ras-related protein Rab-11A OS=Mus musculus GN=Rab... [more]
RB11A_HUMAN8.547e-3857.94Ras-related protein Rab-11A OS=Homo sapiens GN=RAB... [more]
RB11A_CHICK8.547e-3857.94Ras-related protein Rab-11A OS=Gallus gallus GN=RA... [more]
RB11A_CANFA8.547e-3857.94Ras-related protein Rab-11A OS=Canis familiaris GN... [more]
RB11A_BOVIN8.547e-3857.94Ras-related protein Rab-11A OS=Bos taurus GN=RAB11... [more]
RAA1B_ARATH8.547e-3856.10Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RIC2_ORYSJ8.547e-3856.10Ras-related protein RIC2 OS=Oryza sativa subsp. ja... [more]
RB11E_LOTJA8.547e-3857.72Ras-related protein Rab11E OS=Lotus japonicus GN=R... [more]
RAB1_DISOM1.069e-3753.79Ras-related protein ORAB-1 OS=Discopyge ommata PE=... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.