GO241506

Overview
NameGO241506
Unique NameGO241506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.450e-37
Identity = 69/124 (55.65%), Postives = 91/124 (73.39%), Query Frame = 1
Query:  163 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y+FK ++IGD+ VGKS +L +F    F      TIGVEF  R + I +K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R+TF+H+  WLE+ R HA+ N+ IMLIGNK DL  +RA
Sbjct:   14 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRA 137          

HSP 2 Score: 28.1054 bits (61), Expect = 1.450e-37
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V TE+ ++FA++ GL F+E SA
Sbjct:  138 VPTEDAKEFAQKEGLFFLETSA 159          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.452e-37
Identity = 64/126 (50.79%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y YLFK ++IGD+GVGK+CLL +F++  F      TIG++F  R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT  ++F+++ +W+ +  +HA++++  M++GNKCD+  +R
Sbjct:    4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKR 129          

HSP 2 Score: 29.6462 bits (65), Expect = 1.452e-37
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAKT 607
            VS E GE+ A ++G+ F+EASAK+
Sbjct:  131 VSKERGEKLAIDYGIKFLEASAKS 154          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.890e-37
Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +F+   F      TIGVEF  R I +D+K +K QIWDTAGQE +R+IT +YYRGA GAL+VYDITR  TF ++  WL++ R H + N+ IML+GNK DL H RA
Sbjct:   11 YDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRA 136          

HSP 2 Score: 25.409 bits (54), Expect = 1.890e-37
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            VSTE+ + FA+     FME SA
Sbjct:  137 VSTEDAKAFAERENTFFMETSA 158          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 151.369 bits (381), Expect = 1.890e-37
Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  133 LINQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            + ++ +  Y YLFK ++IGD+GVGKS +L +FT   F      TIGVEF  R   ++ K IK QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++  WL + R HA++N+ IM+ GNK DL H R+
Sbjct:    1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRS 134          

HSP 2 Score: 25.409 bits (54), Expect = 1.890e-37
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V+ E+G+  A++ GL F+E SA
Sbjct:  135 VAEEDGQSLAEKEGLSFLETSA 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.890e-37
Identity = 71/126 (56.35%), Postives = 93/126 (73.81%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + ++ + +K QIWDTAGQE +R+IT +YYRGA GALLVYD+T+  TF +++ WL++ R HA++N+ IMLIGNK DL H RA
Sbjct:    9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRA 134          

HSP 2 Score: 26.1794 bits (56), Expect = 1.890e-37
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V+TE+ + +A++ GL F+E SA
Sbjct:  135 VATEDAQSYAEKEGLSFIETSA 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.890e-37
Identity = 69/126 (54.76%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRA 534
            Y+YLFK ++IGD+GVGKS +L +FT   F      TIGVEF  + + ++ K IK QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R++F+++  WL + R HA++++ IM++GNK DL H RA
Sbjct:    9 YSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRA 134          

HSP 2 Score: 26.5646 bits (57), Expect = 1.890e-37
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            VS +EG+  A++ GL F+E SA
Sbjct:  135 VSEDEGKALAEKEGLFFLETSA 156          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.890e-37
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 1
Query:  157 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAH 525
            Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  +   ++ K +K QIWDTAGQE +R+IT +YYRGA GALL+YD+TR  TF + A WL + R H + N+ +MLIGNKCDL H
Sbjct:   10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRH 132          

HSP 2 Score: 26.5646 bits (57), Expect = 1.890e-37
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASA 601
            V TEE + FA+   L FME SA
Sbjct:  136 VKTEEAKAFAERESLYFMETSA 157          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.892e-37
Identity = 68/123 (55.28%), Postives = 91/123 (73.98%), Query Frame = 1
Query:  163 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            YL K+IIIG   VGKSCLL +F D +F+     TIGV+F +R++ I  K +KLQIWDTAGQE FRS+  SYYRG+AG  LVYD+T RE++NH+ +WL D +  A+ ++TI+L+GNK DL  +R
Sbjct:    6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQR 128          

HSP 2 Score: 26.1794 bits (56), Expect = 1.892e-37
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  548 EGEQFAKEHGLIFMEASAKT 607
            E  + A+E+GL+FME SA T
Sbjct:  134 EASRIAQENGLLFMETSALT 153          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.210e-37
Identity = 68/129 (52.71%), Postives = 95/129 (73.64%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRACE 540
            +Y YL K ++IGD+GVGKSCLLL+F++  F P    TIG++F  R I ++ K IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T  ++F ++ +W+ +  QHA  ++  MLIGNKCD+A ++  +
Sbjct:   11 AYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVD 139          

HSP 2 Score: 25.0238 bits (53), Expect = 3.210e-37
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            V +  G+  A E+G+ F+E SAK
Sbjct:  138 VDSSRGKSLADEYGIKFLETSAK 160          
BLAST of GO241506 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 3.210e-37
Identity = 64/126 (50.79%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  154 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRR 531
            +Y YLFK ++IGD+GVGK+C+L +F++  F      TIG++F  R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT  ++F+++ +W+ +  +HA+A++  M++GNKCD+  +R
Sbjct:    4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 129          

HSP 2 Score: 29.261 bits (64), Expect = 3.210e-37
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 2
Query:  536 VSTEEGEQFAKEHGLIFMEASAK 604
            VS E GE+ A ++G+ FME SAK
Sbjct:  131 VSKERGEKLALDYGIKFMETSAK 153          
The following BLAST results are available for this feature:
BLAST of GO241506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RB11D_TOBAC1.450e-3755.65Ras-related protein Rab11D OS=Nicotiana tabacum GN... [more]
RAB8B_BOVIN1.452e-3750.79Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B ... [more]
RB11B_TOBAC1.890e-3757.14Ras-related protein Rab11B OS=Nicotiana tabacum GN... [more]
RAA2C_ARATH1.890e-3752.99Ras-related protein RABA2c OS=Arabidopsis thaliana... [more]
RAA2A_ARATH1.890e-3756.35Ras-related protein RABA2a OS=Arabidopsis thaliana... [more]
RGP2_ORYSJ1.890e-3754.76Ras-related protein RGP2 OS=Oryza sativa subsp. ja... [more]
RAA1A_ARATH1.890e-3756.10Ras-related protein RABA1a OS=Arabidopsis thaliana... [more]
RAB4_DICDI1.892e-3755.28Ras-related protein Rab-4 OS=Dictyostelium discoid... [more]
RAB8A_DICDI3.210e-3752.71Ras-related protein Rab-8A OS=Dictyostelium discoi... [more]
RAB8A_RAT3.210e-3750.79Ras-related protein Rab-8A OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank description154 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 261 5, mRNA sequence.