GO241497

Overview
NameGO241497
Unique NameGO241497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241497 vs. ExPASy Swiss-Prot
Match: TAF9_SCHPO (Transcription initiation factor TFIID subunit 9 OS=Schizosaccharomyces pombe GN=taf9 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.448e-16
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 2
Query:  284 YSEHA-GKNT-IDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQLSIERSNLLRQRKKWKKMNRVPSRM 574
            Y+EH+ G+N  I  +DV+LAV S++N SF+ PP +E LLELA  RN+ PLP+     G  LPPE+  L  PN+ +S E      Q+ + K+ N   SRM
Sbjct:   58 YAEHSRGQNAPISVEDVRLAVASQINHSFTGPPPKEFLLELAMERNRKPLPQIQPSYGFRLPPEKYCLTQPNWIVSNE-----TQQNQPKEENSSDSRM 151          

HSP 2 Score: 34.6538 bits (78), Expect = 2.448e-16
Identity = 15/44 (34.09%), Postives = 25/44 (56.82%), Query Frame = 1
Query:  151 PRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQV 282
            P+D +++  +L S+GV  Y   V  Q L   +RY   ++ D+QV
Sbjct:   14 PKDVRLIHLILSSLGVPSYSQTVPLQLLTFAHRYTQQLIQDSQV 57          
The following BLAST results are available for this feature:
BLAST of GO241497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
TAF9_SCHPO2.448e-1644.44Transcription initiation factor TFIID subunit 9 OS... [more]

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Properties
Property NameValue
Genbank description145 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 246 5, mRNA sequence.