GO241450

Overview
NameGO241450
Unique NameGO241450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.792e-54
Identity = 112/202 (55.45%), Postives = 141/202 (69.80%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            D  +Y+PY+EK++RLTALH  IE LLF   +N EH+  L DR KPI+F+MARLD+VKN+TG+VE Y KN +LRELVNLVVV G                 +M+ L+ TYKL+GQFRWI+AQ+  + +R   LY   +  + A     F + FGLTV+EAMTCGLPTFAT HGGPAEII HG SGF IDPYH ++AAEL+ +F
Sbjct:  523 DTSVYYPYTEKKRRLTALHPEIEDLLFSSVENKEHICVLKDRYKPILFTMARLDNVKNLTGIVEWYAKNPKLRELVNLVVVGG-DRRKESKDLEEQAQMKKMYGLIDTYKLNGQFRWISAQK--NRVRNGELYRCIADTKGAFVQPAFYEAFGLTVIEAMTCGLPTFATIHGGPAEIIVHGTSGFHIDPYHGEKAAELIVNF 721          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.267e-53
Identity = 112/202 (55.45%), Postives = 142/202 (70.30%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            D+++YF YSE +KRLTA H  I++LL+   +NDEH+  L DR+KPI+F+MARLD VKN+TGLVE Y KN +LR LVNLVVV G                 +M+EL++T+ L+GQFRWI++Q   + +R   LY   +  + A     F + FGLTVVEAMTCGLPTFAT HGGPAEII HG SGF IDPYH +QAA+L+ADF
Sbjct:  527 DINLYFSYSETEKRLTAFHPEIDELLYSDVENDEHLCVLKDRTKPILFTMARLDRVKNLTGLVEWYAKNPRLRGLVNLVVVGG-DRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQM--NRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADF 725          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 5.051e-53
Identity = 109/203 (53.69%), Postives = 139/203 (68.47%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQ----QIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM IYFPY+E+++RLT  H  IE+LL+   +N EH+  L D+ KPI+F+MARLD VKN++GLVE YGKN++LREL NLVVV G                 +M++L++ YKL+GQFRWI++Q    + G + R +      + A       + FGLTVVEAMTCGLPTFATC GGPAEII HG SGF IDPYH DQAA+ +ADF
Sbjct:  529 DMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGG-DRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYI---CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADF 727          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.919e-52
Identity = 108/202 (53.47%), Postives = 133/202 (65.84%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM +YFPY+E  KRLTA H  IE+LL+   +NDEH   L DR+KPI+FSMARLD VKNMTGLVE YGKN+ L++L NLV+VAG                  M+ L++ YKL G  RWI+AQ   + +R   LY      + A     F + FGLTV+EAMTCGLPT ATCHGGPAEII  G SG  IDPYH D+AA+++ +F
Sbjct:  523 DMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVAG-DHGKESKDREEQAEFKRMYSLIEEYKLKGHIRWISAQM--NRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNF 721          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.919e-52
Identity = 109/202 (53.96%), Postives = 139/202 (68.81%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            D  +YF Y EK+KRLT LH  IE+LL+   +N+EH+  + D++KPI+F+MARLD+VKN+TG VE Y K+ +LRELVNLVVV G                 +M+EL+ TYKL+GQFRWI++Q   + +R   LY   +  + A     F + FGLTVVEAMTCGLPTFAT HGGPAEII HG SGF IDPYH +Q AEL+ +F
Sbjct:  529 DTSVYFSYKEKEKRLTTLHPEIEELLYSSVENEEHLCIIKDKNKPILFTMARLDNVKNLTGFVEWYAKSPKLRELVNLVVVGG-DRRKESKDLEEQAQMKKMYELIDTYKLNGQFRWISSQM--NRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNF 727          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.293e-52
Identity = 109/203 (53.69%), Postives = 140/203 (68.97%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQ----QIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            D  IYFPY+E  +RLT+ +  IE+LL+   +N+EH+  L DRSKPI+F+MARLD VKN+TGLVE YGKN++LRELVNLVVVAG                 +M+EL++TYKL+GQFRWI++Q    + G + R +      + A       + FGLTVVEAM  GLPTFAT +GGPAEII HG SGF IDPYH D+AA+L+ +F
Sbjct:  527 DQTIYFPYTETSRRLTSFYPEIEELLYSTVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAG-DRRKESKDLEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVI---CDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEF 725          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 4.727e-51
Identity = 106/202 (52.48%), Postives = 131/202 (64.85%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM +YFPY+E  KRLTA H  IE+LL+   +NDEH   L D++KPI+FSMARLD VKNMTGLVE YGKN+ LR+L NLV+V G                 +M+ L+  YKL G  RWI+AQ   + +R   LY      +       F + FGLTV+EAMTCGLPT ATCHGGPAEII  G SG  IDPYH D+AA+++ +F
Sbjct:  524 DMSVYFPYTEADKRLTAFHPEIEELLYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCG-DHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQM--NRVRNGELYRYICDTKGVFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNF 722          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 6.174e-51
Identity = 105/202 (51.98%), Postives = 132/202 (65.35%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM +Y+PY+E  KRLTA H  IE+L++   +N EH   L D+ KPI+FSMARLD VKNMTGLVE YGKN++LREL NLV+VAG                 +M+ L+  YKL G  RWI+AQ   + +R   LY      + A     F + FGLTV+E+MTCGLPT ATCHGGPAEII  G SG  IDPYH D+AA+++ +F
Sbjct:  524 DMSVYYPYTETDKRLTAFHPEIEELIYSDVENSEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGKNARLRELANLVIVAG-DHGKESKDREEQAEFKKMYSLIDEYKLKGHIRWISAQM--NRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIESMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNF 722          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.053e-50
Identity = 107/203 (52.71%), Postives = 139/203 (68.47%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQ----QIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            D  IYFPY+E  +RLT+ +  IE+LL+   +N+EH+  L DR+KPI+F+MARLD VKN+TGLVE YGKN++LRELVNLVVVAG                 +M+ L++TYKL+GQFRWI++Q    + G + R +      + A       + FGLTVVEAM  GLPTFAT +GGPAEII HG SGF IDPYH D+AA+L+ +F
Sbjct:  527 DQTIYFPYTETSRRLTSFYPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAG-DRRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVI---CDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEF 725          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.375e-50
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            D+ IYFPY+E  KRLT+LH  IE+LL+   +N EH   L+DR+KPI+FSMARLD VKN+TGLVE YG+N +L+ELVNLVVV G                 +M +L++ Y L+G  RWI+AQ   + +R   LY      + A     F + FGLTVVEAMTCGLPTFAT +GGPAEII HG SG+ IDPY  D+A+ L+ DF
Sbjct:  532 DLSIYFPYTESHKRLTSLHPEIEELLYSQTENTEHKFVLNDRNKPIIFSMARLDRVKNLTGLVELYGRNKRLQELVNLVVVCG-DHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQM--NRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQGDKASALLVDF 730          
The following BLAST results are available for this feature:
BLAST of GO241450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SUS2_DAUCA7.792e-5455.45Sucrose synthase isoform 2 OS=Daucus carota PE=2 S... [more]
SUS1_SOLTU2.267e-5355.45Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUS1_ARATH5.051e-5353.69Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUS1_HORVU1.919e-5253.47Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS1_DAUCA1.919e-5253.96Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUSY_VICFA7.293e-5253.69Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUS2_ORYSJ4.727e-5152.48Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUS1_MAIZE6.174e-5151.98Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUSY_MEDSA1.053e-5052.71Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS2_MAIZE1.375e-5052.97Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank description98 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 182 5, mRNA sequence.