GO241450

Overview
NameGO241450
Unique NameGO241450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4042 contig Csv1_Contig4042:1013..1615. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 8.915e-50
Identity = 106/202 (52.48%), Postives = 133/202 (65.84%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM IYFP++E QKRLT+LH  IE+LLF   +N EH   L D+ KPI+FSMARLDHVKN+TGLVE YG+N +L+ELVNLVVV G                 +M  L++ Y L+G  RWI+AQ   + +R   LY      + A       + FGLTV+EAMTCGLPTFAT +GGPAEII HG SG+ IDPY  D+A+ L+ +F
Sbjct:  532 DMSIYFPFTESQKRLTSLHLEIEELLFSDVENTEHKFVLKDKKKPIIFSMARLDHVKNLTGLVELYGRNPRLQELVNLVVVCG-DHGKESKDKEEQAEFKKMFNLIEQYNLNGHIRWISAQM--NRVRNGELYRYICDMRGAFVQPALYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQNDKASALLVEF 730          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.164e-49
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM IYFPYSE +KRLT+LH  IE+LL+    N+EH   L DR+KPI+FSMARLD VKN+TGLVE YG+N +L+ELVNLVVV G                 +M +L++ Y L+G  RWI+AQ   + +R   LY      + A     F + FGLTVVE+MTCGLPTFAT +GGPAEII +G SGF IDPY  D+A+ L+ +F
Sbjct:  532 DMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCG-DHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQM--NRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEF 730          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.521e-49
Identity = 107/202 (52.97%), Postives = 133/202 (65.84%), Query Frame = 3
Query:    3 DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLY---SRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELMADF 599
            DM IYFPY+E+QKRLT+LH  IE+LLF   +N EH   L D+ KPI+FSMARLD VKNMTGLVE YG+N +L+ELVNLVVV G                 +M +L++ Y L G  RWI+AQ   + +R   LY      + A     F + FGLTV+EAMTCGLPTFAT +GGPAEII +G SG+ IDPY  D+A+ L+  F
Sbjct:  532 DMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVVCG-DHGKVSKDKEEQVEFKKMFDLIEKYNLSGHIRWISAQM--NRVRNGELYRYICDMKGAFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVGF 730          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15
Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 3
Query:   84 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELM 590
            DP    E +   S+  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D               + +L+  Y L GQ  +    +   V     L ++ +    +  F++ FGLT++EA   GLP  AT +GGP +II    +G  IDP+     A+ +
Sbjct:  467 DPVIWSEIMRFFSNGRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLISILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADAL 635          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14
Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 3
Query:   84 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELM 590
            DP    E +   S+  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D               + +L+  Y L GQ  +    +   V     L ++ +    +  F++ FGLT++EA   GLP  AT +GGP +I     +G  IDP+     A+ +
Sbjct:  460 DPPIWSEIMRFFSNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADAL 628          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 3
Query:  117 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELM 590
            L++  KP++ +++R D  KN+T LV+ +G+   LREL NL ++ G  D               + +L+  Y L GQ  +    +   V     L S+ +    +  F++ FGLT++EA   GLP  AT +GGP +I     +G  +DP+  D  A  +
Sbjct:  491 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSGGNASVLTTVLKLIDRYDLYGQVAFPKHHKQSDVPEIYRLASKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANAL 648          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14
Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 3
Query:   84 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELM 590
            DP    E +   ++  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D               + +L+  Y L GQ  +    +   V     L ++ +    +  F++ FGLT++EA   GLP  AT +GGP +I     +G  +DP+     A+ +
Sbjct:  459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADAL 627          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14
Identity = 49/174 (28.16%), Postives = 85/174 (48.85%), Query Frame = 3
Query:   84 DPEQNDEHVGT-----LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELM 590
            D +  D H+ T      S+  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D               + +++  Y L G   +    +   V     L ++ +    +  F++ FGLT++EA   GLP  AT +GGP +I     +G  +DP++ +  A+ +
Sbjct:  453 DSKSPDPHIWTEIMRFFSNPRKPMILALARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKYDLYGLVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADAL 626          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.030e-13
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   84 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAA----ELMAD 596
            DP    E +   S   KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D               + +L+  Y L GQ  +    +   V     L ++ +    +  F++ FGLT++EA   GLP  AT +GGP +I     +G  +DP+     A    +L+AD
Sbjct:  457 DPPIWAEIMRFFSKPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDQYDLYGQVAYPKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALLKLVAD 631          
BLAST of GO241450 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.294e-13
Identity = 48/169 (28.40%), Postives = 82/169 (48.52%), Query Frame = 3
Query:   84 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVXXXXXXXXXXXXXEMHELMKTYKLDGQFRWIAAQQIGHVMRALSLYSRHQSALCSLLFMKLFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFXIDPYHPDQAAELM 590
            DP    E +   S+  KP++ ++AR D  KN+T LV+ +G+   LR+L NL ++ G  D               + +++  Y L GQ  +    +   V     L ++ +    +  F++ FGLT++EA   GLP  AT +GGP +I     +G  +DP+     A+ +
Sbjct:  457 DPPIWAEIMRFFSNPRKPMILALARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADAL 625          
The following BLAST results are available for this feature:
BLAST of GO241450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SUS3_ORYSJ8.915e-5052.48Sucrose synthase 3 OS=Oryza sativa subsp. japonica... [more]
SUS1_ORYSJ1.164e-4952.97Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUS2_HORVU1.521e-4952.97Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]
SPS_SPIOL9.312e-1530.77Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS_VICFA2.074e-1430.18Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS2_CRAPL3.538e-1430.38Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS1_CITUN3.538e-1428.99Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS1_CRAPL4.621e-1428.16Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
SPS_BETVU1.030e-1330.29Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SOLTU2.294e-1328.40Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank description98 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 182 5, mRNA sequence.