GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BOVIN (2-oxoglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=OGDH PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRS-ASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            G  F+R+I +    +     ++RL+ C GKVYY+L   R  R     VAI R+EQL PFP+DL+ +E+++YP+AE+ WCQEE  N G Y Y+ PRL   +        + + Y GR P AA ATG  + H+ E   L+  +   +  K
Sbjct:  878 GTHFQRVIPEDGPAAQNPGNVKRLLFCTGKVYYDLTRERKARDMVEQVAITRIEQLSPFPFDLLLQEVQKYPSAELAWCQEEHKNQGYYDYVKPRLRTTISRA-----KPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDAFK 1020          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_DICDI (2-oxoglutarate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=ogdh PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.089e-23
Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = 1
Query:   67 EGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAH 399
            E I R+V C G+VYY L   R   +  DVAI RVEQL PFP+DLV  +L+ YPNA+ +WCQEEPMNMG + YI P      K ++R    DI Y GR   A+ A   +  H
Sbjct:  886 EKINRIVFCTGQVYYNLIASRESNNIKDVAIIRVEQLHPFPFDLVAEQLQHYPNAKAIWCQEEPMNMGYWNYIYPYFISTFKHINRPA--DITYTGRPSSASPAVASHTLH 994          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: OGDHL_XENLA (2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis GN=ogdhl PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.404e-23
Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSA-SDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAH 399
            G  F+R+I +    S   + ++R++ C GKVYYEL + R ++   S VAI R+EQ+ PFP+DLV++E ++Y  +E+VWCQEE  NMG Y Y+  R    +          + YVGR P AA ATG    H
Sbjct:  872 GTNFQRVIPENGAASHSPQEVKRVIFCTGKVYYELVKERHRKGLDSQVAITRLEQISPFPFDLVKQEAEKYATSELVWCQEEHKNMGYYDYVKARFLTILNHA-----RPVWYVGRDPAAAPATGNKNTH 996          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_OCHA4 (2-oxoglutarate dehydrogenase E1 component OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  868 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 999          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUSU (2-oxoglutarate dehydrogenase E1 component OS=Brucella suis GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUSI (2-oxoglutarate dehydrogenase E1 component OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUO2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUME (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUMB (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUC2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   37 KDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  872 KDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ODO1_BOVIN1.680e-2438.512-oxoglutarate dehydrogenase, mitochondrial OS=Bos... [more]
ODO1_DICDI1.089e-2348.652-oxoglutarate dehydrogenase, mitochondrial OS=Dic... [more]
OGDHL_XENLA5.404e-2341.542-oxoglutarate dehydrogenase-like, mitochondrial O... [more]
ODO1_OCHA41.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Ochro... [more]
ODO1_BRUSU1.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUSI1.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUO21.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUME1.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUMB1.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUC21.204e-2240.602-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.