GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2814 contig Csv1_Contig2814:637..1322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUAB (2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 1
Query:   28 RLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            R  KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  869 RYNKDKGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUA2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus (strain 2308) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 1
Query:   28 RLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            R  KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  869 RYNKDKGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BRUA1 (2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus (strain S19) GN=sucA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 1
Query:   28 RLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            R  KD+      +  IRR+V C GKVYY+L E R KR   DV + RVEQL PFP   +  EL R+ +AE+VWCQEEP NMG +++I P L   +  +D    + ++Y GR   A+ ATG    H+ +    ++ ++
Sbjct:  869 RYNKDKGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYLEWVLAHID-AKHQRVRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RICBR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia bellii (strain RML369-C) GN=sucA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            I +++ C GKVYY+L E R   S S +AI R+EQL PF   +V   LK+Y  A E +WCQEEPMNMG + YI+  L  A+K  + G   + KY+GR   A+ A G  QAH K+Q +L+++++
Sbjct:  807 ITKVILCSGKVYYDLFEMRG--SNSSIAIIRLEQLYPFEKKVVVELLKKYNKASEFIWCQEEPMNMGAWRYITSHLNNALK--EAGINNEFKYIGREESASPAVGSLQAHNKQQEKLLKEAL 924          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_DICDI (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Dictyostelium discoideum GN=odhA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 52/138 (37.68%), Postives = 80/138 (57.97%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELV 423
            G  F+ ++ D +  ++    I+R++ C GKV+Y+L E R  ++ +DVAI R+EQ+ PFPY  +Q E+ RY NA +  W QEE  N G ++++ PR         +     IKY+GR P AA A G    H KE ++L+
Sbjct:  763 GTHFQTVLSDPDTINNAST-IKRVIFCSGKVFYDLQEERKAKNFNDVAIIRLEQIAPFPYQRIQEEINRYSNATKFAWVQEEQQNGGCWSFVEPRFKQRYPQTSQ-----IKYIGRPPLAASAIGISSIHKKEVSQLL 894          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RALEH (2-oxoglutarate dehydrogenase E1 component OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhA PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = 1
Query:   22 FKRLIKDQNGHSDLEEG-IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQ 426
            F+ +I D   H +L    ++R++ C GKVYY+L   R +R A+D A+ R+EQL PFP+  V  ELK+YPNA EIVWCQ+EP N G + ++   +   M+ +  G  + + Y GR   A+ A G Y  H ++Q  L++
Sbjct:  809 FETVIPD---HEELNASKVKRVIMCSGKVYYDLVNTRKEREANDTAVIRLEQLYPFPHKAVAAELKKYPNATEIVWCQDEPQNQGAWFFVQHYI---MENMTDG--QKLGYAGRPASASPAVGYYAKHNEQQKALLE 937          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_SCHPO (2-oxoglutarate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=kgd1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20
Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 1
Query:   31 LIKDQNGHSDLE-EGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            L ++++G S L  E I +L+ C G+V+  L + R +    ++AI RVEQL PF +  +   + +YPN  EI+WCQEEP+N G +TY+ PR+   +K + R     ++Y GR P A+ A G  Q H+ EQ + +  ++
Sbjct:  874 LEEEEHGKSILPPEKIEKLIICSGQVWVALSKAREENKIDNIAITRVEQLHPFGWKQMAANISQYPNLKEIIWCQEEPLNAGAWTYMEPRIYTILKHLGRDL--PVRYAGRPPSASVAAGNKQQHLAEQEQFLNDAL 1008          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_EXISA (2-oxoglutarate dehydrogenase E1 component OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=odhA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 56/146 (38.36%), Postives = 87/146 (59.59%), Query Frame = 1
Query:   34 IKDQNGHSDLEEGIRRLVXCXGKVYYELDE--GRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIKAPA 462
            I +Q G  +  E + RLV C GK+  +L E  G+ + S   + I RVE++ PFP   ++  + RYPNA EIVW QEEP NMG +TYI PRL    +AV    + D++Y+GR   ++ A G   AH +EQ  ++++++  + + + A
Sbjct:  801 IVEQPGLGENTEKVERLVFCTGKMAIDLAEAVGKSEESLDFLHIVRVEEIYPFPVREIRDVISRYPNAREIVWVQEEPKNMGAWTYIEPRL----EAVTTNRL-DVRYIGRRRRSSPAEGNPTAHKQEQARIIREALSRDVVSSGA 941          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_COXBU (2-oxoglutarate dehydrogenase E1 component OS=Coxiella burnetii GN=sucA PE=3 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19
Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 1
Query:   19 RFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRX--KRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQ 438
            + K LI +   H   +  I R++ C GKVYY+L   R   K   + +A+ R+EQL PFPYD ++ EL++YPNA +++WCQEEP N G +     RL   M+  D  T+E   YVGR+  AA A G    +VK Q +LV ++++
Sbjct:  798 QLKLLIPEIEKHDPKK--ITRVILCSGKVYYDLLAKRREHKGKLNHIAMIRIEQLYPFPYDELKAELEKYPNAKQVIWCQEEPKNQGAWFCTRHRLIKCMR--DDQTLE---YVGRSAFAAPAAGYSALYVKLQEQLVNQALE 933          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RICFE (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis GN=sucA PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19
Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            I +++ C GKVYY+L E R   S  ++AI R+EQL PF   LV   LK+Y    E +WCQEEP NMG + YI   L   +K  + G   + KYVGR   A+ A G  QAH K+Q +L+++++
Sbjct:  858 ITKVILCSGKVYYDLFEMRGNNS--NIAIIRLEQLYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGAWRYIVSHLNDVLK--EAGINNEFKYVGREESASPAVGSLQAHNKQQEKLLKEAL 975          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ODO1_BRUAB1.204e-2240.442-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUA21.204e-2240.442-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_BRUA11.204e-2240.442-oxoglutarate dehydrogenase E1 component OS=Bruce... [more]
ODO1_RICBR6.606e-2145.082-oxoglutarate dehydrogenase E1 component OS=Ricke... [more]
DHTK1_DICDI6.606e-2137.68Probable 2-oxoglutarate dehydrogenase E1 component... [more]
ODO1_RALEH8.628e-2140.152-oxoglutarate dehydrogenase E1 component OS=Ralst... [more]
ODO1_SCHPO1.472e-2037.232-oxoglutarate dehydrogenase, mitochondrial OS=Sch... [more]
ODO1_EXISA7.304e-2038.362-oxoglutarate dehydrogenase E1 component OS=Exigu... [more]
ODO1_COXBU1.246e-1940.562-oxoglutarate dehydrogenase E1 component OS=Coxie... [more]
ODO1_RICFE2.776e-1943.442-oxoglutarate dehydrogenase E1 component OS=Ricke... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.