GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2814 contig Csv1_Contig2814:637..1322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RICCN (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii GN=sucA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            I +++ C GKVYY+L E R   S  ++AI R+EQL PF   LV   LK+Y    E +WCQEEP NMG + YI   L  A+K  + G   + KYVGR   A+ A G  Q H K+Q +L++ ++
Sbjct:  809 ITKVILCSGKVYYDLFEMRGNNS--NIAIIRLEQLYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGTWCYIVSHLNDALK--EAGIKNEFKYVGREESASPAVGSLQVHNKQQEKLLRTAL 926          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_YEAST (2-oxoglutarate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=KGD1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 1
Query:   22 FKRLIKD-QNGHS-DLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQ 438
            F+ +I+D ++G S   +E  +RLV   G+VY  L + R        A  ++EQL PFP+  ++  L  YPN E IVWCQEEP+NMG + Y  PRL   +K  D+     ++Y GR P  A A G    H+ E+   ++   Q
Sbjct:  871 FQWIIEDIEHGKSIGTKEETKRLVLLSGQVYTALHKRRESLGDKTTAFLKIEQLHPFPFAQLRDSLNSYPNLEEIVWCQEEPLNMGSWAYTEPRLHTTLKETDKYKDFKVRYCGRNPSGAVAAGSKSLHLAEEDAFLKDVFQ 1012          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RICTY (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia typhi GN=sucA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 1
Query:   64 EEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            +  I +++ C GKVYY+L   R   S  ++ I R+EQL PF   LV   LK+Y  A+  +WCQEEP NMG + YI+  L  A+K  +     + KYVGR   A+ A G  Q H K+Q +L+ +++  + IK
Sbjct:  807 KNNITKVILCSGKVYYDLFAKRVHNS--NIVIIRLEQLYPFEKTLVASLLKKYNKAQAFIWCQEEPKNMGAWNYIAEHLNDALKEAEIN--NEFKYVGREESASPAVGSLQVHNKQQEKLLMEALGDDIIK 933          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_ECOLI (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli (strain K12) GN=sucA PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 1
Query:   67 EGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPE 444
            +G++R+V C GKVYY+L E R K +  DVAI R+EQL PFP+  +Q  L+++ +  + VWCQEEP+N G + Y S       + +  G    ++Y GR   A+ A G    H K+Q +LV  ++  E
Sbjct:  812 KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW-YCSQH--HFREVIPFGA--SLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE 933          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_ECOL6 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O6 GN=sucA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 1
Query:   67 EGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPE 444
            +G++R+V C GKVYY+L E R K +  DVAI R+EQL PFP+  +Q  L+++ +  + VWCQEEP+N G + Y S       + +  G    ++Y GR   A+ A G    H K+Q +LV  ++  E
Sbjct:  812 KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW-YCSQH--HFREVIPFGA--SLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE 933          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_ECO57 (2-oxoglutarate dehydrogenase E1 component OS=Escherichia coli O157:H7 GN=sucA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 1
Query:   67 EGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPE 444
            +G++R+V C GKVYY+L E R K +  DVAI R+EQL PFP+  +Q  L+++ +  + VWCQEEP+N G + Y S       + +  G    ++Y GR   A+ A G    H K+Q +LV  ++  E
Sbjct:  812 KGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAW-YCSQH--HFREVIPFGA--SLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE 933          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RICPR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia prowazekii GN=sucA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18
Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            + +++ C GKVYY+L   R   S  ++ I R+EQL PF   LV   LK+Y  A+  +WCQEEP NMG + YI+  L  A+K  +     + KYVGR   A+ A G  Q H K+Q +L+ +++  + IK
Sbjct:  809 VTKVILCSGKVYYDLFAMRTNNS--NIVIIRLEQLYPFEKKLVASLLKKYNKAQAFIWCQEEPKNMGAWHYIATHLNDALKEAEIN--NEFKYVGREESASPAVGSLQVHNKQQEKLLMEALGDDIIK 932          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_DROME (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Drosophila melanogaster GN=CG1544 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 1
Query:   67 EGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELV 423
            E +R+++ C GK YY L E R KR A D AI R+E LCPFP   +Q +L +Y N +  VW QEE  NMG +T++ PR    +        + + Y GR      ATG  + H +E  E+V
Sbjct:  801 EQVRKVILCSGKHYYTLAEEREKRQAYDTAILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFVRPRFENLIG-------QQLHYCGRCEAPTPATGIGKVHKREVDEIV 913          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_HAEIN (2-oxoglutarate dehydrogenase E1 component OS=Haemophilus influenzae GN=sucA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17
Identity = 47/122 (38.52%), Postives = 71/122 (58.20%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            ++R+V C GKVYY+L E R   +  DVAI R+EQL PFP++ V++ L+ Y +  + VWCQEEP+N G +         A+    +     +KY GR   A+ A G    H K+Q +LV+ ++
Sbjct:  817 VKRVVMCSGKVYYDLLEQRRANNQKDVAIIRIEQLYPFPHEDVKKALEPYAHVTDYVWCQEEPLNQGAWYCSKHNFESAIPESVK-----LKYAGRPASASPAVGYMSLHTKQQKQLVEDAL 933          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_GEOSW (2-oxoglutarate dehydrogenase E1 component OS=Geobacillus sp. (strain WCH70) GN=odhA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 51/131 (38.93%), Postives = 70/131 (53.44%), Query Frame = 1
Query:   40 DQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQ 426
            +Q G  +  E + R++ C GK   +L E   K    D + I RVE+L PFP + +Q    RYPN  EI+W QEEP NMG + Y+ P+L     A D     D+ Y+GR   A+ A G    H KEQ  ++Q
Sbjct:  819 EQKGLGENREKVERIILCTGKFAIDLAEQINKMEGLDWLHIVRVEELYPFPKEELQAIFARYPNVKEIIWAQEEPKNMGSWCYVEPKLREI--APDE---VDVSYIGRRRRASPAEGDPVVHRKEQERIIQ 944          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ODO1_RICCN4.734e-1943.442-oxoglutarate dehydrogenase E1 component OS=Ricke... [more]
ODO1_YEAST1.055e-1837.322-oxoglutarate dehydrogenase, mitochondrial OS=Sac... [more]
ODO1_RICTY1.055e-1839.692-oxoglutarate dehydrogenase E1 component OS=Ricke... [more]
ODO1_ECOLI2.350e-1839.372-oxoglutarate dehydrogenase E1 component OS=Esche... [more]
ODO1_ECOL62.350e-1839.372-oxoglutarate dehydrogenase E1 component OS=Esche... [more]
ODO1_ECO572.350e-1839.372-oxoglutarate dehydrogenase E1 component OS=Esche... [more]
ODO1_RICPR3.069e-1839.842-oxoglutarate dehydrogenase E1 component OS=Ricke... [more]
DHTK1_DROME6.836e-1840.00Probable 2-oxoglutarate dehydrogenase E1 component... [more]
ODO1_HAEIN1.166e-1738.522-oxoglutarate dehydrogenase E1 component OS=Haemo... [more]
ODO1_GEOSW2.199e-1638.932-oxoglutarate dehydrogenase E1 component OS=Geoba... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.