GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_XENLA (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Xenopus laevis GN=dhtkd1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16
Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXK--RSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            G  F+ +I D +      + + +++ C GK YY L + R          AI RVE+LCPFP + +Q+E+ RYP A + +W QEEP NMG +T+++PR    +          ++ V R    A A G    H ++Q E+  K++
Sbjct:  793 GKTFRSVIGDSSADP---KSVSKVILCSGKHYYALHKQREALGEQGRSSAIIRVEELCPFPLEALQQEIHRYPKAKDFIWSQEEPQNMGAWTFVAPRFEKQLAC-------KLRLVSRPALPAPAVGIGTLHQQQQEEITVKTL 926          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIN (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans GN=sucA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   22 FKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQ 438
            F+ ++ D +G     + I ++V   GKVYY+L + + +    +VA+ RVEQ+ PFP   +Q  LK + NA + VWCQEEP N G + ++  R+   +    R     + Y GR    + A G  + H++EQ +LV  + Q
Sbjct:  787 FREILIDDSGSKP--DKIEKVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKNAKQFVWCQEEPKNQGAWFFVRERIEELLPGNAR-----LVYAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIC (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=sucA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   22 FKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQ 438
            F+ ++ D +G     + I ++V   GKVYY+L + + +    +VA+ RVEQ+ PFP   +Q  LK + NA + VWCQEEP N G + ++  R+   +    R     + Y GR    + A G  + H++EQ +LV  + Q
Sbjct:  787 FREILIDDSGSKP--DKIEKVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKNAKQFVWCQEEPKNQGAWFFVRERIEELLPGNAR-----LVYAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_AZOVI (2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii GN=sucA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQ 426
            + RLV C GKVYY+L + R      D+AI R+EQL PFP + +   +  Y N + +VWCQEEPMN G + Y S      + +  +  +  ++Y GR   AA A G    H ++Q +L+Q
Sbjct:  822 VERLVLCSGKVYYDLLDKRHAEGREDIAIVRIEQLYPFPEEELAEVMAPYTNLKHVVWCQEEPMNQGAW-YCSQHHMRRVASAHKKEL-FLQYAGREASAAPACGYASMHAEQQEKLLQ 938          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BUCAP (2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sucA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 1
Query:   22 FKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            FK +I + + +   ++ ++R++ C GK+YY+L E R K   ++V + R+EQL PFP D +   LK Y    + +WCQEEP N G + YI   L+  +          + YV R   A+ A G    H KEQ +L+  +
Sbjct:  788 FKNVINEIDKN---QKEVKRIIFCSGKIYYDLLEYRNKCDINNVLLIRIEQLYPFPKDEILTILKSYSYVQDFIWCQEEPHNQGAWFYIKDLLSTLLPLNSH-----LNYVSRPSAASPAAGHILIHRKEQEKLINNA 917          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_HUMAN (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            ++ LV C GK +Y L + R    A   D AI RVE+LCPFP D +Q+E+ +Y +  + +W QEEP NMG ++++SPR    +          ++ VGR P    A G    H+ +  +++ K+
Sbjct:  802 VKTLVFCSGKHFYSLVKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWSFVSPRFEKQLAC-------KLRLVGRPPLPVPAVGIGTVHLHQHEDILAKT 917          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_CAEEL (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial OS=Caenorhabditis elegans GN=ZK836.2 PE=2 SV=4)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            G  ++ +I ++  H+   + I++++   GK +  +++ R +R   D VAI RVE LCPFP   +Q  LK+YP A + VW QEEP N G ++++ PR   A+          +K+ GR   A  AT   + H KE  E++ ++
Sbjct:  777 GTTYQNVISEE--HATSSQKIKKVIFVSGKHWINVEKARDERGLKDSVAIVRVEMLCPFPVVDLQAVLKKYPGAQDFVWSQEEPRNAGAWSFVRPRFENALGV-------RLKFAGRPELAWTATAIGEHHTKEAEEVINQT 909          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_MOUSE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Mus musculus GN=Dhtkd1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            G  FK +I D +      + ++ L+ C GK +Y L + R        D AI R+E+LCPFP D +Q+E+ +Y +  +++W QEEP NMG ++++SPR    +          ++ V R P  A A G    H ++  +++ K+
Sbjct:  786 GTAFKPVIGDSSVDP---KNVKTLIFCSGKHFYALLKQRESLGTKKHDFAIIRLEELCPFPLDALQQEMSKYKHVRDVIWSQEEPQNMGPWSFVSPRFEKQLAC-------RLRLVSRPPLPAPAVGIGTVHQQQHEDILSKT 918          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_PONAB (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Pongo abelii GN=DHTKD1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15
Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            ++ LV C GK +Y L + R    A   D AI RVE+LCPFP D +Q+E+ +Y +  + +W QEEP NMG + ++SPR    +          ++ VGR P    A G    H+ +  +++ K+
Sbjct:  802 VKTLVFCSGKHFYSLMKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWLFVSPRFEKQLAC-------KLRLVGRPPLPVPAVGIGTVHLHQHEDILAKT 917          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BUCAI (2-oxoglutarate dehydrogenase E1 component OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sucA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 1
Query:   79 RLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRY-PNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            RL+ C GK+YY+L   R ++  + + + R+EQL PFP   + + LK Y    + +WCQEEP N G + YI   L+  +          +KY+GR+  A+ A G    H K+Q +++  ++
Sbjct:  792 RLIFCSGKIYYDLLRNRREKKINSIILIRIEQLYPFPEGEILKILKNYFYIKDFIWCQEEPYNQGAWFYIKDCLSNILP-----LDASLKYIGRSSSASPAVGYISIHKKQQEKIIYNAL 906          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHTK1_XENLA2.872e-1632.64Probable 2-oxoglutarate dehydrogenase E1 component... [more]
ODO1_LEPIN4.899e-1633.572-oxoglutarate dehydrogenase E1 component OS=Lepto... [more]
ODO1_LEPIC4.899e-1633.572-oxoglutarate dehydrogenase E1 component OS=Lepto... [more]
ODO1_AZOVI8.357e-1638.662-oxoglutarate dehydrogenase E1 component OS=Azoto... [more]
ODO1_BUCAP1.091e-1534.062-oxoglutarate dehydrogenase E1 component OS=Buchn... [more]
DHTK1_HUMAN1.425e-1534.96Probable 2-oxoglutarate dehydrogenase E1 component... [more]
DHTK1_CAEEL1.425e-1533.10Probable 2-oxoglutarate dehydrogenase E1 component... [more]
DHTK1_MOUSE1.862e-1531.47Probable 2-oxoglutarate dehydrogenase E1 component... [more]
DHTK1_PONAB2.432e-1534.96Probable 2-oxoglutarate dehydrogenase E1 component... [more]
ODO1_BUCAI4.148e-1533.332-oxoglutarate dehydrogenase E1 component OS=Buchn... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.