GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_DANRE (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Danio rerio GN=dhtkd1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXK--RSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPR----LAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAH 399
            G  FK +I D + +      ++R++ C GK YY L + R     +  + A+ RVE+LCPFP + +Q+EL +Y NA E +W QEEP NMG ++++SPR    LA  ++ V R  +        AP     T  +Q H
Sbjct:  786 GTSFKPIIGDSSVNP---ASVQRVLFCSGKHYYALLKHRETIPEAEKNTALVRVEELCPFPTEALQQELNKYTNAKEFIWSQEEPQNMGCWSFVSPRFEKQLACKLRLVSRPALP-------APAVGIGTLHHQQH 911          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BACHD (2-oxoglutarate dehydrogenase E1 component OS=Bacillus halodurans GN=odhA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 1
Query:   19 RFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD---VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            RFK +++  N   +  E + R+V C GK+  +L +   K +  D   V I RVEQL PFP + +Q    RYPN  EIVW QEEP NMG + ++  ++    +A   G   +++Y GR   ++ A G    H +EQ  +V +++
Sbjct:  807 RFKTVLEQPN-LGESHEKVERIVLCSGKIAIDLQDRIEKEADKDWDWVHIVRVEQLYPFPKEPLQEIFARYPNVKEIVWSQEEPRNMGAWPFVQSKI---RRAAPNGI--NVRYEGRTYRSSPAEGDPIIHKQEQERIVTETL 943          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: DHTK1_RAT (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus GN=Dhtkd1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 46/143 (32.17%), Postives = 75/143 (52.45%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            G  FK +I D +      + ++ L+ C GK +Y L + R    A   D AI R+E+LCPFP D +Q+E+ +Y +  +I+W QEEP NMG ++++ PR    +          ++ V R P  A A G    H ++   ++ K+
Sbjct:  785 GTAFKPVIGDSSVDP---KNVKTLIFCSGKHFYALLKQRESLGAKKRDFAIIRLEELCPFPLDSLQQEMGKYKHVQDIIWSQEEPQNMGPWSFVYPRFEKQLAC-------KLRLVSRPPLPAPAVGIGTVHQQQHEAILFKT 917          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_GEOKA (2-oxoglutarate dehydrogenase E1 component OS=Geobacillus kaustophilus GN=odhA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRL-AXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQ 426
            + R+V   GK+  +L E   K  + D + I R+E+L PFP + V+  + RYPN  E+VW QEEP NMG + Y+ PRL A A + V      D+ Y+GR   A+ A G    H KEQ  +++
Sbjct:  829 VERIVFGTGKLMIDLAEQIGKMESLDWLHIVRIEELYPFPEEAVKDIIARYPNVKELVWVQEEPKNMGAWLYMEPRLRALAPEGV------DVSYIGRRRRASPAEGDPVVHRKEQERIIR 943          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BACSK (2-oxoglutarate dehydrogenase E1 component OS=Bacillus clausii (strain KSM-K16) GN=odhA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSA--SDVAICRVEQLCPFPYDLVQRELKRYPNAEIV-WCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            ++R++ C GK+  EL +   K     S V I RVE+L PFP   ++  LK +PN E V W QEEP NMG +T++ PR+   + +        + Y+GR   ++ A G   AH  EQ  +V +S+
Sbjct:  821 VKRIILCSGKLAIELQDYVNKNDEDWSWVHIIRVEELYPFPRRAIRERLKEFPNLEEVKWVQEEPKNMGAWTFMEPRIREILPSG-----VPLSYIGRTYRSSPAEGVSNAHKVEQKRIVTESL 939          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BACA2 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus amyloliquefaciens (strain FZB42) GN=odhA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 53/143 (37.06%), Postives = 76/143 (53.15%), Query Frame = 1
Query:   19 RFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD--VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLA-XAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            RFK  + +Q+G S   E + R+V   GKV  ++ +   K       + I R+EQL PFP    +    + PN  EIVW QEEP NMG ++YISP L+  A K V      +++Y+GR   ++ A G    H KEQ  +V  S+
Sbjct:  805 RFKP-VYEQSGLSHAYEKVTRVVLSSGKVSIDISDHFNKMEGDKDWLHIARIEQLYPFPAKDTKELFAKLPNLQEIVWVQEEPQNMGAWSYISPYLSEIAPKGV------NVQYIGRRRRSSPAEGDPTVHKKEQERIVSDSL 940          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCUA (2-oxoglutarate decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kgd PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELV 423
            + R++   GK+YYE+   + K    DVAI RVEQL P P   ++  L RYPNA E  W QEEP N G +    PR    +  +    +  +K + R   +A ++G  + H  EQ E++
Sbjct: 1120 VNRILLTSGKIYYEMVARKAKDKREDVAIVRVEQLAPLPRRRLRETLDRYPNAKEFFWVQEEPANQGAW----PRFGLELPELLPEKLSGVKRISRRAMSAPSSGSSKVHAVEQQEIL 1233          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCVP (2-oxoglutarate decarboxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=kgd PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 1
Query:   76 RRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            +R++   GK+YYEL   + K    DVAI R+EQL P P   +   L  YPNAE   W QEEP N G +    P L   +  V    +  IK + R   +A ++G  + H  EQ E++ ++
Sbjct: 1126 KRILLTSGKLYYELAARKSKEGRDDVAILRLEQLAPLPKRRLAATLDEYPNAEQYFWVQEEPANQGAW----PTLGLTLPEVLPEKLAGIKRISRRAMSAPSSGSSKVHAVEQQEIIDEA 1241          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCSS (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain MCS) GN=kgd PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQP 441
            + R++   GK+YYEL   + K S  DVAI R+EQL P P   +   L +YPN  E  W QEEP N G +    P     +  +       IK + R   +A ++G  + H  EQ E++ ++  P
Sbjct: 1150 VTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPNVEEKFWVQEEPANQGAW----PTFGLTLPEMLPDHFTGIKRISRRAMSAPSSGSSKVHAVEQQEILDEAFAP 1269          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCSK (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain KMS) GN=kgd PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQP 441
            + R++   GK+YYEL   + K S  DVAI R+EQL P P   +   L +YPN  E  W QEEP N G +    P     +  +       IK + R   +A ++G  + H  EQ E++ ++  P
Sbjct: 1150 VTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPNVEEKFWVQEEPANQGAW----PTFGLTLPEMLPDHFTGIKRISRRAMSAPSSGSSKVHAVEQQEILDEAFAP 1269          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHTK1_DANRE7.075e-1536.03Probable 2-oxoglutarate dehydrogenase E1 component... [more]
ODO1_BACHD9.240e-1534.972-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
DHTK1_RAT2.058e-1432.17Probable 2-oxoglutarate dehydrogenase E1 component... [more]
ODO1_GEOKA2.688e-1439.672-oxoglutarate dehydrogenase E1 component OS=Geoba... [more]
ODO1_BACSK5.989e-1436.292-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACA25.989e-1437.062-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
KGD_MYCUA7.822e-1435.592-oxoglutarate decarboxylase OS=Mycobacterium ulce... [more]
KGD_MYCVP2.276e-1335.832-oxoglutarate decarboxylase OS=Mycobacterium vanb... [more]
KGD_MYCSS2.972e-1333.872-oxoglutarate decarboxylase OS=Mycobacterium sp. ... [more]
KGD_MYCSK2.972e-1333.872-oxoglutarate decarboxylase OS=Mycobacterium sp. ... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.