GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCSJ (2-oxoglutarate decarboxylase OS=Mycobacterium sp. (strain JLS) GN=kgd PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQP 441
            + R++   GK+YYEL   + K S  DVAI R+EQL P P   +   L +YPN  E  W QEEP N G +    P     +  +       IK + R   +A ++G  + H  EQ E++ ++  P
Sbjct: 1145 VTRILLTSGKIYYELVARKNKESRDDVAIVRIEQLAPLPKRRLAETLDKYPNVDEKFWVQEEPANQGAW----PTFGLTLPEMLPDHFTGIKRISRRAMSAPSSGSSKVHAVEQQEILDEAFAP 1264          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BACSU (2-oxoglutarate dehydrogenase E1 component OS=Bacillus subtilis GN=odhA PE=3 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 1
Query:   34 IKDQNGHSDLEEGIRRLVXCXGKVYYELDE--GRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            + +Q+G S   E + RLV   GKV  ++ +   + +     + I R+EQL PFP   V+    + PN  EIVW QEEP NMG + YISP L    +    G    ++Y+GR   ++ A G    H KEQ  +V  S+
Sbjct:  809 VYEQSGLSHDYEKVTRLVLSSGKVSIDISDHFNKLEDGKEWLHIARIEQLYPFPAKGVKELFAKLPNLKEIVWVQEEPQNMGAWGYISPYLT---EIAPEGV--SVQYIGRRRRSSPAEGDPTVHKKEQERIVSDSL 940          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCPA (2-oxoglutarate decarboxylase OS=Mycobacterium paratuberculosis GN=kgd PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 41/118 (34.75%), Postives = 61/118 (51.69%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELV 423
            + R++   GK+YYEL   + K +  DVAI R+EQL P P   +   L RYPN  E  W QEEP N G +    PR    +  +    +  +K + R   +A ++G  + H  EQ E++
Sbjct: 1129 VSRVLLTSGKLYYELVARKNKDNRDDVAIVRIEQLAPLPKRRLGETLDRYPNVREYFWVQEEPANQGAW----PRFGLELPELLPDKLTGLKRISRRAMSAPSSGSSKVHAVEQQEII 1242          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCS2 (2-oxoglutarate decarboxylase OS=Mycobacterium smegmatis GN=kgd PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELV 423
            + RL+   GK+YYEL   + K +  DVAI R+EQL P P   +   L RYPN  E  W QEEP N G +    P     +  +       +K + R   +A ++G  + H  EQ E++
Sbjct: 1109 VTRLLLTSGKIYYELAARKAKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAW----PSFGLTLPEILPDHFTGLKRISRRAMSAPSSGSSKVHAVEQQEIL 1222          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BUCBP (Oxoglutarate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sucA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 39/137 (28.47%), Postives = 72/137 (52.55%), Query Frame = 1
Query:   28 RLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            R + D+  + D ++ ++R++ C GK+YY+L   R      ++ I R+EQ+ P P   +   L  Y +  + +WCQEEP N G + Y    L   +    +     + YVGR+  A+ ATG  + H ++Q +++  ++
Sbjct:  782 RTVIDEIDNLDTKK-VQRIILCSGKIYYDLLTQRRINQQKNIVILRIEQIYPRPTKKLSAILYNYKDVHDYIWCQEEPCNQGAWLYHKSYLKKLLPKHSK-----LNYVGRSSSASPATGYMKIHKEQQKKIIYDAL 912          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCTU (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis GN=kgd PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            + R++   GK+YYEL   + K + +D+AI R+EQL P P   ++  L RY N  E  W QEEP N G +    PR    +  +    +  IK + R   +A ++G  + H  EQ E++ ++
Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCTA (2-oxoglutarate decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kgd PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            + R++   GK+YYEL   + K + +D+AI R+EQL P P   ++  L RY N  E  W QEEP N G +    PR    +  +    +  IK + R   +A ++G  + H  EQ E++ ++
Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCBP (2-oxoglutarate decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kgd PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            + R++   GK+YYEL   + K + +D+AI R+EQL P P   ++  L RY N  E  W QEEP N G +    PR    +  +    +  IK + R   +A ++G  + H  EQ E++ ++
Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: KGD_MYCBO (2-oxoglutarate decarboxylase OS=Mycobacterium bovis GN=kgd PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   73 IRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKS 432
            + R++   GK+YYEL   + K + +D+AI R+EQL P P   ++  L RY N  E  W QEEP N G +    PR    +  +    +  IK + R   +A ++G  + H  EQ E++ ++
Sbjct: 1113 VSRILLTSGKLYYELAARKAKDNRNDLAIVRLEQLAPLPRRRLRETLDRYENVKEFFWVQEEPANQGAW----PRFGLELPELLPDKLAGIKRISRRAMSAPSSGSSKVHAVEQQEILDEA 1229          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_CORGL (2-oxoglutarate dehydrogenase E1 component OS=Corynebacterium glutamicum GN=odhA PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 39/141 (27.66%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   19 RFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQ 438
            +F+ +I D N     +  +++++   GK+YYEL + + K    D+AI R+E L P P++ +   L  YPNA E+++ Q+EP N G + +    L   +  + +     ++ V R   ++ ATG  + H  E+ +L+ ++ +
Sbjct: 1123 KFQSVINDPNVADAAK--VKKVMLVSGKLYYELAKRKEKDGRDDIAIVRIEMLHPIPFNRISEALAGYPNAEEVLFVQDEPANQGPWPFYQEHLPELIPNMPK-----MRRVSRRAQSSTATGVAKVHQLEEKQLIDEAFE 1256          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
KGD_MYCSJ2.972e-1333.872-oxoglutarate decarboxylase OS=Mycobacterium sp. ... [more]
ODO1_BACSU5.070e-1335.772-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
KGD_MYCPA8.648e-1334.752-oxoglutarate decarboxylase OS=Mycobacterium para... [more]
KGD_MYCS21.129e-1234.752-oxoglutarate decarboxylase OS=Mycobacterium smeg... [more]
ODO1_BUCBP1.927e-1228.47Oxoglutarate dehydrogenase OS=Buchnera aphidicola ... [more]
KGD_MYCTU2.516e-1233.062-oxoglutarate decarboxylase OS=Mycobacterium tube... [more]
KGD_MYCTA2.516e-1233.062-oxoglutarate decarboxylase OS=Mycobacterium tube... [more]
KGD_MYCBP2.516e-1233.062-oxoglutarate decarboxylase OS=Mycobacterium bovi... [more]
KGD_MYCBO2.516e-1233.062-oxoglutarate decarboxylase OS=Mycobacterium bovi... [more]
ODO1_CORGL3.286e-1227.662-oxoglutarate dehydrogenase E1 component OS=Coryn... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.