GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BACC0 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain AH820) GN=odhA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 1
Query:   73 IRRLVXCXGKVYY----ELDEGRXKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGXYTYISPRL-AXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            ++RLV   GK+      E++  + + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMG + Y++P L   A   V  G      Y+GR   ++ + G   AH  EQ  +V  ++
Sbjct:  817 VKRLVLSTGKMAIDLAAEIESDKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPILFELAGDKVKTG------YIGRPDRSSPSGGDPFAHKAEQELIVSHAL 937          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_BACP2 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus pumilus (strain SAFR-032) GN=odhA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 1
Query:   34 IKDQNGHSDLEEGIRRLVXCXGKVYYELDEG--RXKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSI 435
            + +Q G     E + RLV   GKV  ++ +   + +     + I RVEQL PFP   ++  L +  N E IVW QEEP NMG + YI P L        +     ++Y+GR   ++ A G    H KEQ  +V  S+
Sbjct:  809 VLEQPGLVHDHEKVSRLVLSSGKVSIDISDRFTQMEEPKDWLHIARVEQLYPFPAKDIKAILSKLTNLEEIVWTQEEPQNMGAWGYIEPYLREIAPEKVK-----VRYIGRRRRSSTAEGDPTVHKKEQERIVSDSL 940          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ODO1_BACC04.745e-1134.652-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACP28.094e-1133.582-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]

Pages

back to top
Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.