GO241419

Overview
NameGO241419
Unique NameGO241419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+GQ VDA SGKTF   +P T +VIA V      D+ RAV +A  A  +  W  MT  ERSRI+ RA +++ +  +ELA LET + GK   ++
Sbjct:   11 IHGQRVDATSGKTFRTVNPATGDVIAEVQVASQADVERAVQSA--AEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12
Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGK 598
            I+G +VDA++ +TF   +P   EV+A +     ED+ RAV  A K   +  W  MT  ERSRI+ RA D++ +  +ELAALET + GK
Sbjct:   11 IDGGYVDASNTETFDSINPANGEVLAKIQRASKEDVERAVVAAEKG--QKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGK 96          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G + DA S  TF   +P   EV+A V     ED+ RAV +A K   +  W  MT  ERSRI+ RA +++ +  +ELAALET + GK + ++
Sbjct:   11 IDGGYTDAGSDATFDAINPANGEVLAQVQRATKEDVERAVVSAEKG--QKIWAAMTAMERSRILRRAVEILRERNDELAALETLDTGKAFSET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGK 598
            I+G +VDA++ +TF   +P   EV+A +     +D+ RAV  A K   +  W  MT  ERSRI+ RA D++ +  +ELAALET + GK
Sbjct:   11 IDGGYVDASNPETFDAINPANGEVLAQIQRAGKDDVERAVVAAEKG--QKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGK 96          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEPK (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G +VDA S  TF   +P T EV+A+V      D+ +AV +A +   +  W  MT  +RSRI+ RA D++ +  +ELA LET + GK Y ++
Sbjct:   11 IDGAYVDAGSDATFEAINPATGEVLAHVQRATEADVEKAVESAERG--QKVWAAMTAMQRSRILRRAVDILRERNDELAMLETLDTGKSYSET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEPG (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G +VDA S  TF   +P T EV+A+V      D+ +AV +A +   +  W  MT  +RSRI+ RA D++ +  +ELA LET + GK Y ++
Sbjct:   11 IDGAYVDAGSDATFEAINPATGEVLAHVQRATEADVEKAVESAERG--QKVWAAMTAMQRSRILRRAVDILRERNDELAQLETLDTGKSYSET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEP1 (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G +VDA S  TF   +P T EV+A+V      D+ +AV +A +   +  W  MT  +RSRI+ RA D++ +  +ELA LET + GK Y ++
Sbjct:   11 IDGAYVDAGSDATFEAINPATGEVLAHVQRATEADVEKAVESAERG--QKVWAAMTAMQRSRILRRAVDILRERNDELAMLETLDTGKSYSET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G +VDA S  TF   +P T EV+A+V      D+ +AV +A +   +  W  MT  +RSRI+ RA D++ +  +ELA LET + GK Y ++
Sbjct:   11 IDGAYVDAGSDATFEAINPATGEVLAHVQRATQADVEKAVESAERG--QKVWAAMTAMQRSRILRRAVDILRERNDELAMLETLDTGKSYSET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G +  A SG+TF   +P    V+A V     ED+ RAV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++
Sbjct:   11 IHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I+G +  A SG+TF   +P    V+A V     ED+ RAV +A++   +  W  MT  ERSRI+ RA D++ +  +ELA LET + GK Y ++
Sbjct:   11 IHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSET 101          
The following BLAST results are available for this feature:
BLAST of GO241419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
BETB_STRM52.021e-1244.09Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_PSESM2.021e-1243.18Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSEF52.640e-1240.86Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_PSEU23.448e-1242.05Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSEPK3.448e-1239.78Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEPG3.448e-1239.78Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEP13.448e-1239.78Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEE43.448e-1239.78Betaine aldehyde dehydrogenase OS=Pseudomonas ento... [more]
BETB_ECOLI3.448e-1239.78Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLC3.448e-1239.78Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank description67 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 151 5, mRNA sequence.