GO241419

Overview
NameGO241419
Unique NameGO241419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 601
            I+G +VDA+S +TF   +P   EV+A VAE  A D+ RAV +A +   +  W  +T  ER+RIM RA DL+ +  +ELA LET + GKP
Sbjct:   11 IHGAYVDASSNQTFESINPANGEVLAEVAEAGAADLERAVESAEQG--QRIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKP 97          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 601
            I GQ+V A+SG+TF   +P T EV+A V      D+ RAVA+A +   +  W  MT  +RSRI+ RA D++ +  +ELA LET + GKP
Sbjct:   11 IGGQYVAASSGQTFDSINPATGEVLAKVQRASQADVDRAVASAAEG--QKVWAAMTAMQRSRILRRAVDILRERNDELAELETLDTGKP 97          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I G++V+A+SG TF   +P   EV+A V     ED+ RAV +A +   +  W  MT  +RSRI+ RA D++ +  +ELAALET + GKP  ++
Sbjct:   11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I G++V+A+SG TF   +P   EV+A V     ED+ RAV +A +   +  W  MT  +RSRI+ RA D++ +  +ELAALET + GKP  ++
Sbjct:   11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 613
            I G++V+A+SG TF   +P   EV+A V     ED+ RAV +A +   +  W  MT  +RSRI+ RA D++ +  +ELAALET + GKP  ++
Sbjct:   11 IGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 101          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 604
            I G+FVDA   KT+   +P    VI  V+     D+ +AVA A++AF+ G W K+   +R R++ R AD++E++ EELA +E  + G  Y
Sbjct:  426 IGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDRGAVY 515          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 601
            ING + D+ SG TF   +P   E IA +   +A+D+ +AVA A++   +  W  MT  ERSRI+ RA D++    +ELAA+ET + GKP
Sbjct:   11 INGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKP 97          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 601
            ING + D+ SG TF   +P   E IA +   +A+D+ +AVA A++   +  W  MT  ERSRI+ RA D++    +ELAA+ET + GKP
Sbjct:   11 INGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKP 97          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 601
            ING + D+ SG TF   +P   E IA +   +A+D+ +AVA A++   +  W  MT  ERSRI+ RA D++    +ELAA+ET + GKP
Sbjct:   11 INGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKP 97          
BLAST of GO241419 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  335 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIGRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 601
            ING + D+ SG TF   +P   E IA +   +A+D+ +AVA A++   +  W  MT  ERSRI+ RA D++    +ELAA+ET + GKP
Sbjct:   11 INGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKP 97          
The following BLAST results are available for this feature:
BLAST of GO241419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
BETB_PSEU51.400e-1346.07Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
BETB_PSEMY1.400e-1344.94Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]
BETB_PSEAE1.400e-1341.94Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEAB1.400e-1341.94Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA81.400e-1341.94Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
FTHFD_RAT1.828e-1338.8910-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
BETB_YERPY1.828e-1342.70Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPS1.828e-1342.70Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPP1.828e-1342.70Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPN1.828e-1342.70Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]

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Properties
Property NameValue
Genbank description67 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 151 5, mRNA sequence.