GO241413

Overview
NameGO241413
Unique NameGO241413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 2
Query:   14 IVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGS-XNSYAIXXKDEIXRVAKAXR 352
            I++ A+ I+     +NPIQV+VDA+ NSGPRE  TRI   G+   Q+VD+SP  R++ A   +  GA + A ++ K+IA+CLADEL+ A+K     S+A+  K+E  RVA++ R
Sbjct:   81 IIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 2
Query:    2 MAVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKAXR 352
            +A RIV+ A +II     +NP+ V+V A+ N+GPRE   R+   G+   +AVD +P  RV+ A+  +  GA +++F++ ++I  CLADE+I AA     S+A+  KD I RVAKA R
Sbjct:   69 IAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDSIERVAKAAR 185          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_DESMO (30S ribosomal protein S7P OS=Desulfurococcus mobilis GN=rps7p PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    2 MAVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKAXR 352
            +A  IVK A +II +   +NPIQV+V A+ N+ PRE  TRI   G+    +VD++PL R++ A+  L  GAR  AF +   I E LA+E++ AA     SYAI  K+EI R+A + R
Sbjct:   82 LAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPREETTRIMYGGITYHVSVDVAPLRRIDLALRHLTEGARMKAFHSPIPIEEALAEEIVLAASNDPKSYAIQKKEEIERIALSSR 198          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.886e-19
Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    2 MAVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKAXR 352
            +A  IVK + E+I L   +NP+QV+V A+ N+ PRE  TRI   G+    +VDI+PL R++ A+  L  GAR  AF N  +I E LA+E+  AA     SYA+  K+EI R+A + R
Sbjct:   82 LAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITYHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKEEIERIALSSR 198          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19
Identity = 50/114 (43.86%), Postives = 76/114 (66.67%), Query Frame = 2
Query:    5 AVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKA 346
            A +IV+ A EII     +NP+Q++V AV N+ PRE  TRI   G+  + AVDISP  RV+ ++  +  GA ++AF+N K+I ECLA+E++ AA+    S+AI  K+E  R+A++
Sbjct:   71 AYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVAVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKERIARS 184          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19
Identity = 51/114 (44.74%), Postives = 75/114 (65.79%), Query Frame = 2
Query:    5 AVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKA 346
            A  IV+ A+EII     QNP+QV+V AV N+ PRE  TRI   G+  + AVDI+P  RV+ ++  +  GA +SAF+N K+ A+CLADE++ A+     S+A+  K+E  RVA++
Sbjct:   72 AYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQIAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLASDEDSRSFAVQKKEEKERVARS 185          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 2
Query:    5 AVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKAXR 352
            ++  VK A EII L   +NP++V+V AV NS P E  TRI   G V   +VD+SPL RV+ A+  +  G +E+AFR  K++ E LA+ LI AA  + ++ ++  K+E+ R+A+A R
Sbjct:   84 SINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAANNTTDAPSVKKKNELERIAQASR 199          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    2 MAVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKAXR 352
            +A+RIV+ A EI+     +NPI+V+ DAV N+GPRE   R+   G+   ++VD +P+ RVN A+  +  G   ++ +  K +A  LA+ELI AA G    Y++  ++E  RVAK+ R
Sbjct:   78 LAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANGDVKCYSVAKREERERVAKSAR 194          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 48/117 (41.03%), Postives = 74/117 (63.25%), Query Frame = 2
Query:    2 MAVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGSXNSYAIXXKDEIXRVAKAXR 352
            +A+RIV  A +I+     +NP+QV+V+AV N+GPRE   R+   G+   +AVD +P  RV+ A+  +  G+ ++AF++ ++ AECLA ELI A+      ++I  KD   RVAKA R
Sbjct:   70 IALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAASNRDAKCFSINRKDGKERVAKAAR 186          
BLAST of GO241413 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.572e-18
Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 2
Query:    2 MAVRIVKHAMEIIXLLXXQNPIQVIVDAVINSGPREXATRIGSAGVVRRQAVDISPLXRVNQAIYXLPPGARESAFRNIKTIAECLADELINAAKGS-XNSYAIXXKDEIXRVAKAXR 352
            + + IV+ A EII     +NP++V+V+A+ N GPRE  TRI   G+   Q+VD+SP  R++ A+  +  G   SA +N K+ A+CLADE++ A+K     S+A+  K+E  RVA++ R
Sbjct:   71 VTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASKADMQRSFAVRKKEEKERVAQSAR 188          
The following BLAST results are available for this feature:
BLAST of GO241413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
RS7_METVS3.886e-1943.8630S ribosomal protein S7P OS=Methanococcus vanniel... [more]
RS7_METTP3.886e-1941.8830S ribosomal protein S7P OS=Methanosaeta thermoph... [more]
RS7_DESMO3.886e-1943.5930S ribosomal protein S7P OS=Desulfurococcus mobil... [more]
RS7_DESK13.886e-1943.5930S ribosomal protein S7P OS=Desulfurococcus kamch... [more]
RS7_METTH5.075e-1943.8630S ribosomal protein S7P OS=Methanobacterium ther... [more]
RS7_METST5.075e-1944.7430S ribosomal protein S7P OS=Methanosphaera stadtm... [more]
RS7_CENSY3.290e-1842.2430S ribosomal protein S7P OS=Cenarchaeum symbiosum... [more]
RS7_METHJ4.297e-1839.3230S ribosomal protein S7P OS=Methanospirillum hung... [more]
RS7_METBU4.297e-1841.0330S ribosomal protein S7P OS=Methanococcoides burt... [more]
RS7_META39.572e-1840.6830S ribosomal protein S7P OS=Methanococcus aeolicu... [more]

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Properties
Property NameValue
Genbank description61 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 145 5, mRNA sequence.