GO241389

Overview
NameGO241389
Unique NameGO241389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:306..917. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.501e-28
Identity = 58/102 (56.86%), Postives = 81/102 (79.41%), Query Frame = 2
Query:   35 GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTE 340
            GEKKRRL +EQV+ LE++F+  NKL+P+RK ++AR LGLQPRQVA+WFQNRRARWKTKQLE+D+  L+ +++A++AD +AL+     L AEI  L+ +  T+
Sbjct:   70 GEKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTK 171          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27
Identity = 59/103 (57.28%), Postives = 81/103 (78.64%), Query Frame = 2
Query:   35 GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQY-EAVKADREALQAQNQKLHAEIMALKSREVTE 340
            GEKKRRL +EQV+ LE++F+  NKL+P+RK ++AR LGLQPRQVA+WFQNRRARWKTKQLE+D+  L+ Q+ +A++AD +AL+     L AEI  L+ +  T+
Sbjct:   70 GEKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTK 172          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 2
Query:   23 GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 328
            G   GEKKRRL  EQV+ LE++FE  NKL+PERK ++AR L L PRQVA+WFQNRRARWKTKQ+E+D+  L+ +++A++ + +AL+     L AEI  L+ R
Sbjct:   59 GGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDR 160          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 2
Query:   23 GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 328
            G   GEKKRRL  EQV+ LE++FE  NKL+PERK ++AR L L PRQVA+WFQNRRARWKTKQ+E+D+  L+ +++A++ + +AL+     L AEI  L+ R
Sbjct:   35 GGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDR 136          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 2
Query:   26 SQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 328
            S A  +KRRL  EQV+ LE++FE    KLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D L+  ++ + A R AL A N+ L ++++ L  +
Sbjct:   77 SSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEK 178          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 2
Query:   26 SQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 328
            S A  +KRRL  EQV+ LE++FE    KLEPERK +LAR LG+ PRQVA+WFQNRRARWKTKQLE D+D L+  ++ + A R AL A N+ L ++++ L  +
Sbjct:   17 SSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQVILLTEK 118          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.147e-23
Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 2
Query:   23 GSQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSC 376
            G   GE+KRR   EQV++LE  F     KLEP  K +LAR LGLQPRQVAIWFQN+RARW++KQ+E DY  L+ QY+A+ A  E+L+ +   L A++  L+ +     +N  ++  GSC
Sbjct:   59 GGGGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQVDELRGK-----LNERQDQSGSC 172          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.147e-23
Identity = 56/112 (50.00%), Postives = 80/112 (71.43%), Query Frame = 2
Query:   44 KRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCS 379
            +RR + EQ+K+LE  FE   +LEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE +Y++L++ Y+ + +  E+L+ + Q L +E+  LK  E T+     +E E  CS
Sbjct:   33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLK--EATQ--KKTQEEERQCS 140          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.338e-23
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 2
Query:    2 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGN-KLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSC 376
            + D    G   GE+KRR   EQV++LE  F     KLEP  K +LAR LGLQPRQVAIWFQN+RARW++KQ+E DY  L+ QY+A+ A  E+L+ +   L  ++  L+ +     +N  ++  GSC
Sbjct:   51 DGDGGGGGGGGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQVDELRGK-----LNERQDQSGSC 171          
BLAST of GO241389 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.657e-22
Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = 2
Query:   23 GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMAL 319
            G  A ++K+R + EQ+K+LE  F    KLEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE++Y  L+  Y+A+    E+L+ +   L  ++  L
Sbjct:   24 GGGAADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKL 122          
The following BLAST results are available for this feature:
BLAST of GO241389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
HOX13_ORYSJ4.501e-2856.86Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HOX13_ORYSI3.810e-2757.28Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HOX8_ORYSJ4.213e-2654.90Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX8_ORYSI4.213e-2654.90Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX25_ORYSJ1.038e-2454.90Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
HOX25_ORYSI1.038e-2454.90Homeobox-leucine zipper protein HOX25 OS=Oryza sat... [more]
HOX24_ORYSI1.147e-2347.90Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
ATHB7_ARATH1.147e-2350.00Homeobox-leucine zipper protein ATHB-7 OS=Arabidop... [more]
HOX24_ORYSJ3.338e-2345.24Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX6_ORYSJ1.657e-2250.51Homeobox-leucine zipper protein HOX6 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank description37 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 119 5, mRNA sequence.