GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGA+A++++S  +A  LGL   A+IR  A     P      P  A   A+  AGLE   I  +E+NEAF   ++A  K   LL    ++VN +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGA+A++++S  +A  LGL   A+IR  A     P      P  A   A+  AGLE   I  +E+NEAF   ++A  K   LL    ++VN +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGA+A++++S  +A  LGL   A+IR  A     P      P  A   A+  AGLE   I  +E+NEAF   ++A  K   LL    ++VN +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 63/156 (40.38%), Postives = 87/156 (55.77%), Query Frame = 3
Query:   48 DKDEGLEKFD----------AAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            D D  L++FD           A L  LRP+F    G+VTAG +S +SDGA+A++++S  +A  LGL   A+IR  A     P      P  A   A+  AGL+   I  +E+NEAF   ++A  K   LL    ++VN +GG ++LGHPLGCSGAR
Sbjct:  196 DADGILKRFDFDEVIRPETNLAGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCNPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   84 KLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQ--VNAHGGXVSLGHPLGCSGAR 473
            ++ KLRP+F    G+VTA  +S +SDGA+A++++S  KA ELGL+  A+IR  A A          P  A  KA+  AG+    +   E+NEAF    ++  K L    +Q  VN +GG ++LGHPLGCSGAR
Sbjct:  222 QMQKLRPAFDPVSGTVTAATSSALSDGASAMLIMSAQKAKELGLKPRARIRSMAVAGCDAAIMGYGPVPATQKALKRAGMSIEDMQTIELNEAFAAQGLSVLKALNLTDKQDIVNINGGAIALGHPLGCSGAR 354          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 3
Query:   21 KKGXHPIIVDKDEGLEKFDAAK-LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG--XDPEQVNAHGGXVSLGHPLGCSGAR 473
            +KG  P+++  DE        + L KL+   K  GSVTAGNAS I+DGAAA+++ S     +  L+  AKI         P     AP+ AI K +  A L   Q+D  E+NEAF   A+A  + LG   D  +VN +GG ++LGHPLG SGAR
Sbjct:  213 RKG-EPVVIATDEHPRASTTLEGLAKLKGVVKPEGSVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGAR 365          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
FADA_YERPE6.907e-1943.613-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadA... [more]
FADA_YERPA6.907e-1943.613-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADA_YERP36.907e-1943.613-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_YERE86.907e-1940.383-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADA_SHIFL6.907e-1942.863-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fa... [more]
FADA_SHIF86.907e-1942.863-ketoacyl-CoA thiolase OS=Shigella flexneri serot... [more]
FADA_SHIBS6.907e-1942.863-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADA_PSYA26.907e-1942.113-ketoacyl-CoA thiolase OS=Psychrobacter arcticus ... [more]
FADA_ECOHS6.907e-1942.863-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 ... [more]
CATF_ACIAD6.907e-1940.91Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.