GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K   LL    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K   LL    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K   LL    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAVLRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 63/154 (40.91%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   24 KGXHPIIVDKDEGLEKFDAAKLMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG---XDPEQVNAHGGXVSLGHPLGCSGAR 473
            K  H  ++  +  LE      L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+  AGL    ID  E+NEAF   ++   K LG      E+VN +GG ++LGHPLGCSGAR
Sbjct:  203 KVMHDEVIRPETSLES-----LATLRPVFDPANGTVTAGTSSALSDGASAMLVMEEEKAKALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALQRAGLTMNDIDLIELNEAFAAQSLPCVKDLGLMDLVDEKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   42 IVDKDEGLEKFDAAKLMK-LRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG---XDPEQVNAHGGXVSLGHPLGCSGAR 473
            ++D DE +      + M  LRP F    G+VTAG +S +SDGA+A++++S  KA  LGL   AKIR  A A          P  A  KA+  AG+    I+  E NEAF   A++  K LG      ++VN +GG ++LGHPLGCSG+R
Sbjct:  202 LIDADETIRPDSTTESMSGLRPVFDPVNGTVTAGTSSALSDGASAMLIMSADKAKALGLTPRAKIRAMAVAGCDAAIMGFGPVPATQKALKRAGMTMADIELAEFNEAFAAQALSCIKQLGWLDTYEDKVNLNGGAIALGHPLGCSGSR 350          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   21 KKGXHPIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            KKG   + VD +    +    +L  L P FK+ G+VTAGNAS +SDGA  +++ S     +     +A++ G+  +   P      P  AI  A+  AGL    +D  ++NEAF    +A QK L  DP + N  GG ++LGHPLG SG+R
Sbjct:  211 KKGKQTMQVD-EHARPQTTLEQLQNLPPVFKKEGTVTAGNASGMSDGAGVVIIASEDAVKKHNFTPLARVVGYFVSGCDPAIMGIGPVPAITGALKKAGLSLKDMDLIDVNEAFAPQFLAVQKSLDLDPSKTNVSGGAIALGHPLGGSGSR 360          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 3
Query:   21 KKGXHPIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            KKG   + VD +    +    +L KL P FK+ G+VTAGNAS I+DGA A+++ S     +     +A+I G+  +   P      P  AI  A+  AGL    +D  E+NEAF    +A ++ L  D  + N +GG ++LGHPLG SG+R
Sbjct:  211 KKGKQTMQVD-EHARPQTTLEQLQKLPPVFKKDGTVTAGNASGIADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSR 360          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 3
Query:   21 KKGXHPIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            KKG   + VD +    +    +L KL   FK+ G+VTAGNAS +SDGA A+++ S     +     +A++ G+  +   P      P  AI  A+  AGL    +D  ++NEAF    ++ QK L  DP + N  GG ++LGHPLG SG+R
Sbjct:  211 KKGKQTMQVD-EHARPQTTLEQLQKLPSVFKKDGTVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLARVVGYFVSGCDPTIMGIGPVPAINGALKKAGLSLKDMDLIDVNEAFAPQFLSVQKALDLDPSKTNVSGGAIALGHPLGGSGSR 360          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 63/154 (40.91%), Postives = 82/154 (53.25%), Query Frame = 3
Query:   21 KKGXHPIIVDKDEGLEKFDAAK-LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG--XDPEQVNAHGGXVSLGHPLGCSGAR 473
            KKG    IV++DE L      + L KL+P      +VTAGNAS ++DGAAAL+L S     + GL   A++ G A    AP      P  A+ K     G+     D  E+NEAF    +A  + LG   D  QVN +GG ++LGHPLG SGAR
Sbjct:  213 KKGE--TIVERDEHLRPETTLEALTKLKPVNGPDKTVTAGNASGVNDGAAALILASAEAVKKHGLTPRARVLGMASGGVAPRVMGIGPVPAVRKLTERLGVAVSDFDVIELNEAFASQGLAVLRELGVADDAPQVNPNGGAIALGHPLGMSGAR 364          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18
Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGAR 351          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
FADA_SHESR9.021e-1942.863-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHESM9.021e-1942.863-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHEON9.021e-1942.863-ketoacyl-CoA thiolase OS=Shewanella oneidensis G... [more]
FADA_SHELP9.021e-1940.913-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADA_PSEA69.021e-1940.943-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]
THIM_RAT1.178e-1837.093-ketoacyl-CoA thiolase, mitochondrial OS=Rattus n... [more]
THIM_PONAB1.178e-1837.753-ketoacyl-CoA thiolase, mitochondrial OS=Pongo ab... [more]
THIM_MOUSE1.178e-1837.093-ketoacyl-CoA thiolase, mitochondrial OS=Mus musc... [more]
PCAF_PSEPU1.178e-1840.91Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida... [more]
FADA_ECOLI1.178e-1842.863-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.