GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = 3
Query:   21 KKGXHPIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            KKG   + VD +    +    +L KL P FK+ G+VTAGNAS ++DGA A+++ S     +     +A+I G+  +   P      P  AI  A+  AGL    +D  E+NEAF    +A ++ L  D  + N +GG ++LGHPLG SG+R
Sbjct:  211 KKGKQTMQVD-EHARPQTTLEQLQKLPPVFKKDGTVTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSR 360          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXD---PEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K LG      +++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXD---PEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K LG      +++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXD---PEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K LG      +++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL    I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AG+    +D  E+NEAF   ++   K   LL    +++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVEDKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL    I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 3
Query:   84 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            +L KL P FK+ G+VTAGNAS +SDGA A+++ S     +     +A+I G+  +   P      P  AI  A+   GL    +D  E+NEAF    +A +K L  DP + N +GG ++LGHPL  SG+R
Sbjct:  231 QLNKLPPVFKKEGTVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPTIMGIGPVPAISGALKKTGLSLKDMDLVEVNEAFAPQYLAVEKSLNLDPSKTNVNGGAIALGHPLAGSGSR 360          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL    I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPAIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18
Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A +LGL+  A +R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
THIM_HUMAN1.539e-1837.093-ketoacyl-CoA thiolase, mitochondrial OS=Homo sap... [more]
FADA_SHEPC1.539e-1842.113-ketoacyl-CoA thiolase OS=Shewanella putrefaciens... [more]
FADA_SHEB81.539e-1842.113-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADA_SHEB51.539e-1842.113-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADA_SHIDS2.010e-1842.113-ketoacyl-CoA thiolase OS=Shigella dysenteriae se... [more]
FADA_SHESA2.010e-1842.113-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_ECO572.010e-1842.113-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
THIM_BOVIN2.625e-1840.003-ketoacyl-CoA thiolase, mitochondrial OS=Bos taur... [more]
FADA_ECO242.625e-1842.113-ketoacyl-CoA thiolase OS=Escherichia coli O139:H... [more]
FADA_ECOL64.477e-1842.113-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.