GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2185 contig Csv1_Contig2185:677..1410. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.030e-22
Identity = 64/146 (43.84%), Postives = 88/146 (60.27%), Query Frame = 3
Query:   42 IVDKDEGLEKFDAA--KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            +VD DE   +F +    L KL+P+FK+ G+VTAGNAS ++D AA LV++S  KA ELG++ +AKI  +  A   P      P  A   AI  AG    ++D  E NEAF   ++A  K L  D  +VN +GG ++LGHP+G SGAR
Sbjct:  212 VVDTDEH-PRFGSTIEGLAKLKPAFKKDGTVTAGNASGLNDCAAVLVIMSAEKAKELGVKPLAKIVSYGSAGVDPAIMGYGPFYATKAAIEKAGWTVDELDLIESNEAFAAQSLAVAKDLKFDMNKVNVNGGAIALGHPIGASGAR 356          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22
Identity = 56/143 (39.16%), Postives = 85/143 (59.44%), Query Frame = 3
Query:   45 VDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            V++DEG+ +     +  L+P F++ G  T+ N+S +SDGA+A++L+   +A ELGL V+A+   F      P      P +AI K +   GLE  QI Y+EINEAF    +   + L    ++VN +GG ++LGHP+G SGAR
Sbjct:  201 VERDEGIRETSLGTIESLKPVFRQDGVCTSANSSQLSDGASAVLLMKRRRADELGLPVVAEFIDFIAVGLKPRDMGLGPVVAIEKLLKRNGLEKDQISYFEINEAFASQVLCCLRKLQIGEDRVNRYGGSIALGHPIGASGAR 343          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  A  KA+  AGL    ID++E+NEAF   A   + + K+L    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSISDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  A  KA+  AGL    ID++E+NEAF   A   + + K+L    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSIADIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22
Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 3
Query:   96 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L+P+F + G+VTA NAS ++DGAAA+V++S  KA ELGL  +A I+ +A+A   P+     P  A  +A++ A      +D  EINEAF   A+A  + +G D  +VN +GG +++GHP+G SG R
Sbjct:  232 LKPAFDKAGTVTAANASGLNDGAAAVVVMSAAKAKELGLTPLATIKSYANAGVDPKVMGMGPVPASKRALSRAEWTPQDLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCR 357          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  A  KA+  AGL    ID++E+NEAF   A   + + K+L    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  A  KA+  AGL    ID++E+NEAF   A   + + K+L    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = 3
Query:   36 PIIVDKDEGLEKFDAAKLM-KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            P++ D DE       A+ + +LRP+F + G+VTAGNAS I+DGAA +V++   KA ELGL  +A++  F+ A   P    T P  A    +  AG     +D  E NEAF   A++  + +G D  +VN +GG +++GHP+G SGAR
Sbjct:  212 PLVFDTDEFPRPGTTAETLGRLRPAFDKQGTVTAGNASGINDGAAMVVVMKESKAKELGLTPMARLVAFSSAGVDPAIMGTGPIPASTDCLKKAGWAPADLDLVEANEAFAAQAMSVNQEMGWDLSKVNVNGGAIAIGHPIGASGAR 358          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 3
Query:   42 IVDKDEGLEKFDAAK-LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            I D DE +      + L  L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LGL+ +A IR  A A   P      P  A  KA+  AGL    ID+ E+NEAF   A   + + K+L    E+VN HGG ++LGHP GCSGAR
Sbjct:  207 IFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGAR 355          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   87 LMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVA---IANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L +L+P+F  +GG+VTAG +S I+DGA+ ++++S  +A +LG+Q +A IR  A A   P      P  +  KA+  AGL    ID+ E+NEAF   A   + + KLL    E+VN HGG ++LGHP GCSGAR
Sbjct:  223 LAELKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQALPVLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGAR 355          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
THLA_CLOAB1.030e-2243.84Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
THIK_ENCCU1.345e-2239.163-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]
FADA_PSESM1.345e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PSEU21.756e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
THIL_RALEH2.294e-2242.86Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]
FADA_PSEPF2.294e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_PSEF52.996e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
THIL_THIVI3.913e-2240.14Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]
FADA_PSEFR3.913e-2242.283-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fa... [more]
FADA_PSEAE3.913e-2244.363-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa ... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.