GO241368

Overview
NameGO241368
Unique NameGO241368
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G DLPYSCRAGSCS+CA              + +DDQ+  G+V  CVAYP SDVT+ET K+EE+
Sbjct:   32 GHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_DATIN (Ferredoxin OS=Datura inoxia PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G DLPYSCRAGSCS+CA              + +DDQ+  G+V  CVAYP SDVT+ET K+EE+
Sbjct:   32 GHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER3_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            G+DLPYSCRAG+CSTCA              F +DDQ+ AG+V  CVAYPTS+ T+ T ++E ++
Sbjct:   34 GLDLPYSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQVKAGFVLTCVAYPTSNATILTHQEESLY 98          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 2
Query:    2 AGIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            AG+DLPYSCRAG+CSTCA              F ED  ++ GYV  CVAYP SD  + T K+ E+F
Sbjct:   90 AGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.608e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 2
Query:    2 AGIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            AG+DLPYSCRAG+CSTCA              F EDD  + G+V  CVAYP SD  + T K+ E+F
Sbjct:   33 AGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEMF 199
            GI+LPYSCRAG+CSTCA              F +DDQ+ AGYV  C+AYP+SD T+ T  ++E++
Sbjct:   35 GIELPYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPSSDCTISTHVEQELY 99          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_MEDSA (Ferredoxin OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            GI LPYSCRAGSCS+CA              F +DDQI+ G+V  CVAY  SDVT+ET K+EE+
Sbjct:   32 GIVLPYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGWVLTCVAYAKSDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            GI+LPYSCRAGSCS+CA              F +D+QI+ G+V  C AYP SDV +ET K+EE+
Sbjct:   31 GIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEEL 94          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G DLPYSCRAGSCS+CA              + +DDQ+  G+V  CVAYP SDVT+ET K+EE+
Sbjct:   32 GHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of GO241368 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-13
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 2
Query:    5 GIDLPYSCRAGSCSTCAXXXXXXXXXXXXXXFXEDDQIDAGYVXXCVAYPTSDVTVETPKDEEM 196
            G DLPYSCRAGSCS+CA              + +DDQ+  G+V  CVAYP SDVT+ET K+EE+
Sbjct:   32 GHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
The following BLAST results are available for this feature:
BLAST of GO241368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
FER_DATME2.608e-1353.13Ferredoxin OS=Datura metel PE=1 SV=1[more]
FER_DATIN2.608e-1353.13Ferredoxin OS=Datura inoxia PE=1 SV=1[more]
FER3_CYACA2.608e-1349.23Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER3_ARATH2.608e-1350.00Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
FER2_RAPSA2.608e-1350.00Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=... [more]
FER_PORYE3.406e-1349.23Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1[more]
FER_MEDSA3.406e-1354.69Ferredoxin OS=Medicago sativa PE=1 SV=1[more]
FER_LEUGL3.406e-1351.56Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER_DATST3.406e-1353.13Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU3.406e-1353.13Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]

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Properties
Property NameValue
Genbank description14 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 30 5, mRNA sequence.