GO241363

Overview
NameGO241363
Unique NameGO241363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:394..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241363 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34
Identity = 75/163 (46.01%), Postives = 98/163 (60.12%), Query Frame = 1
Query:    4 GIXYSNDKMLPMSNLLPMVIPRGIALDPTT*CFQLMHPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAXRX-PIPSDVITGRREKACIEKENNFKQLGXRYRSWAPDRQXRFLNRWIKALCDPRVXHEVRSXWVXYWSQADRXXGQKLAXXXNVRPSI 489
            GI YS+DKML    +      +   L P      +  P+C H NNHYDG MNFMHRDEEVDY+PSR+ P R A    P+P   + GRREKA I K N+FKQ G RYRSW  DRQ RF+ R+  +L  P+V  E+RS W+   ++ D   G K+A   N++ ++
Sbjct:  335 GIYYSDDKML-QCRVFAYADTQRYRLGPNYLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496          
BLAST of GO241363 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 51.9878 bits (123), Expect = 7.547e-11
Identity = 32/116 (27.59%), Postives = 56/116 (48.28%), Query Frame = 1
Query:  115 PKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAXRXPIPSDVITGRREKACIEKENNFKQLGXRYRSWAPDRQXRFLNRWIKALCDPRVXHEVRSXWVXYWSQADRXXGQKLA 462
            PK    N + DG +N  H    V+Y PSR +P     +       ++G  ++A I +E NFKQ G  +RS++   +   + R+ ++L D     E ++  +    + DR  G ++A
Sbjct:  378 PKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLFRSYSAKEKTDLVQRFGESLADTHT--ESKNIMLSVLYKEDRHYGTRVA 491          

HSP 2 Score: 33.8834 bits (76), Expect = 7.547e-11
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3
Query:   48 FAYGDTQRHRLGPNYLMLPVNAPKMS 125
            F+Y DTQ +RLG   L LPVN PK++
Sbjct:  356 FSYADTQMYRLGAIGLSLPVNQPKVA 381          
The following BLAST results are available for this feature:
BLAST of GO241363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CATA3_MAIZE1.127e-3446.01Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATB_PSESY7.547e-1127.59Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]

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Properties
Property NameValue
Genbank description9 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 25 5, mRNA sequence.