GE213428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.110e-26 Identity = 63/77 (81.82%), Postives = 63/77 (81.82%), Query Frame = 2 Query: 185 SSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST 415 SS FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST Sbjct: 3 SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST 79
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.047e-26 Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 2 Query: 188 STFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST 415 ++FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST Sbjct: 2 ASFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST 77
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_SOLLC (V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.182e-25 Identity = 61/76 (80.26%), Postives = 62/76 (81.58%), Query Frame = 2 Query: 188 STFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST 415 S F+GDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST Sbjct: 2 SNFAGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIST 77
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_PLECA (V-type proton ATPase 16 kDa proteolipid subunit OS=Pleurochrysis carterae GN=VAP PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.071e-18 Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 2 Query: 209 TAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII 409 TAP + +GAAYGTAKSGVGV+SMGVM+P+LVMKSI+PVVMAGVLGIYGLIIAVII Sbjct: 8 TAPFFGFMGAAVALIFANLGAAYGTAKSGVGVSSMGVMKPDLVMKSIIPVVMAGVLGIYGLIIAVII 74
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.501e-17 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 182 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS 412 MS SG E A S +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+ Sbjct: 1 MSEAKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIA 77
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Neurospora crassa GN=vma-3 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.501e-17 Identity = 35/52 (67.31%), Postives = 52/52 (100.00%), Query Frame = 2 Query: 257 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS 412 +C+GA+YGTAKSGVG+A+MGV+RP+L++K+IVPV+MAG++GIYGL+++V+IS Sbjct: 24 TCLGASYGTAKSGVGIAAMGVLRPDLIVKNIVPVIMAGIIGIYGLVVSVLIS 75
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_RAT (V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.003e-16 Identity = 38/52 (73.08%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 257 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS 412 S MGAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ Sbjct: 26 SAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 77
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_MOUSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.003e-16 Identity = 38/52 (73.08%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 257 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS 412 S MGAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ Sbjct: 26 SAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 77
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.003e-16 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 182 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS 412 MS + SG E A S +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL++AV+I+ Sbjct: 1 MSESKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIA 77
BLAST of GE213428 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.003e-16 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 182 MSSTFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS 412 MS +G E A S +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+ Sbjct: 1 MSEAKNGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIA 77 The following BLAST results are available for this feature:
BLAST of GE213428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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