GE213340

Overview
NameGE213340
Unique NameGE213340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 4.641e-76
Identity = 137/214 (64.02%), Postives = 165/214 (77.10%), Query Frame = -3
Query:    2 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT---IKPQ----TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 622
            P+INVNDS TKSKFDNLYGCR SL DG+ RATDVM+AGKVAVVCGYGDVGKGCA +LK  G RV+VTEIDPI ALQA MEG +V T+E+   +  ++VTTTGNKDII+ +HMK+M N+AI+CNIGHFD EID+   E      + T   IKP      DR+ F +T   II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL++ +   K
Sbjct:  181 PSINVNDSATKSKFDNLYGCRESLADGVKRATDVMLAGKVAVVCGYGDVGKGCAHSLKSYGCRVLVTEIDPINALQAAMEGFEVTTMEEACKEGRLYVTTTGNKDIILGEHMKQMPNDAILCNIGHFDTEIDIAWAEQQVADGKATVSEIKPSDIGAVDRFTFNDTGRSIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQMELYQNRDNDK 394          

HSP 2 Score: 31.187 bits (69), Expect = 4.641e-76
Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = -2
Query:  621 RYTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 725
            R+ +  + + G+SEETT GV RL  + ++G L  P
Sbjct:  147 RFPELLDNIYGISEETTAGVHRLEVLNKSGKLRVP 181          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 6.050e-76
Identity = 139/201 (69.15%), Postives = 158/201 (78.61%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            F AINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVVCGYGDVGKG A AL+   A+V VTEIDPI ALQA MEG +V+T+E     ADIFVTTTGN+D+I  +HMK MK+ AIVCNIGHFDNEI V  LE +   +   IKPQ D  +FP+    II+LA+GRL+NLGC TGHPSFVMS SF NQ IAQ+EL+
Sbjct:  219 FRAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKVAVVCGYGDVGKGSAQALRALSAQVWVTEIDPINALQAAMEGFKVVTMEWAADKADIFVTTTGNRDVITFEHMKAMKDQAIVCNIGHFDNEIQVAKLEEH--CQWEEIKPQVDHVIFPD-GKRIILLAKGRLVNLGCGTGHPSFVMSNSFANQTIAQIELF 416          

HSP 2 Score: 39.6614 bits (91), Expect = 6.050e-76
Identity = 17/33 (51.52%), Postives = 25/33 (75.76%), Query Frame = -2
Query:  624 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLF 722
            Y++   +++GV+EETTTGV RL +M   GTL+F
Sbjct:  187 YSRKSAQIIGVTEETTTGVHRLKEMSAKGTLMF 219          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 7.897e-76
Identity = 138/200 (69.00%), Postives = 162/200 (81.00%), Query Frame = -3
Query:   23 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 622
            PAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+  GARVI+TEIDPI ALQA MEG +V T+++   + +IFVTTTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW
Sbjct:  176 PAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLL-KNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELW 373          

HSP 2 Score: 36.5798 bits (83), Expect = 7.897e-76
Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = -2
Query:  621 GVSEETTTGVKRLYQMQENGTLLFP 695
            G+SEETTTGV  LY+M+ NG L  P
Sbjct:  152 GISEETTTGVHNLYKMKANGILKVP 176          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 1.030e-75
Identity = 138/200 (69.00%), Postives = 162/200 (81.00%), Query Frame = -3
Query:   23 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 622
            PAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+  GARVI+TEIDPI ALQA MEG +V T+++   + +IFVTTTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW
Sbjct:  176 PAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLL-KNGHRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELW 373          

HSP 2 Score: 36.1946 bits (82), Expect = 1.030e-75
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = -2
Query:  621 GVSEETTTGVKRLYQMQENGTLLFP 695
            G+SEETTTGV  LY+M  NG L  P
Sbjct:  152 GISEETTTGVHNLYKMMANGILKVP 176          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHHA_XENLA (Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy-A PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.343e-75
Identity = 136/200 (68.00%), Postives = 160/200 (80.00%), Query Frame = -3
Query:   23 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 622
            PAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+  GARVI+TEIDPI ALQA MEG +V T+++   + +IFVTTTG  DI+   H + MK+++IVCNIGHFD E+DV  L     VK++ IKPQ DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW
Sbjct:  177 PAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRAFGARVIITEIDPINALQAAMEGYEVTTMDEASKEGNIFVTTTGCADIVEGRHFENMKDDSIVCNIGHFDIELDVKWLNE-NAVKKVNIKPQVDRYLL-KNGRHIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELW 374          

HSP 2 Score: 38.1206 bits (87), Expect = 1.343e-75
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = -2
Query:  621 RYTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 725
            +Y +  + + G+SEETTTGV  LY+M+ +GTL  P
Sbjct:  143 KYPQLLKGIKGISEETTTGVHNLYKMKSSGTLQVP 177          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.751e-75
Identity = 139/201 (69.15%), Postives = 157/201 (78.11%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            F AINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVA V GYGDVGKG A AL+   A+V VTEIDPI ALQA MEG +V+T+E     ADIFVTTTGN+D+I  +HM  MK+ AIVCNIGHFDNEIDV  LE Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+
Sbjct:  221 FRAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKVACVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIFVTTTGNRDVIRHEHMAAMKDQAIVCNIGHFDNEIDVASLEGYEWDE---IKPQVDHIIFPD-GKKIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF 417          

HSP 2 Score: 39.2762 bits (90), Expect = 1.751e-75
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = -2
Query:  624 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLF 722
            Y++   +++GV+EETTTGV RL +M   GTLLF
Sbjct:  189 YSRKGAQIIGVTEETTTGVHRLKEMSAAGTLLF 221          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 1.751e-75
Identity = 137/201 (68.16%), Postives = 157/201 (78.11%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            F AINVNDSVTKSKFDNLYGCR SL DG+ RATDVM+AGK+AVV GYGDVGKGCA AL    A+V VTEIDPICALQA MEG +V+T+E+    ADIFVT TGN  +I  +HM+ MK+ AIVCNIGHFDNEIDV  L+     +   IKPQ D  VFP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+
Sbjct:  216 FAAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMVAGKIAVVAGYGDVGKGCAQALAALRAQVWVTEIDPICALQAAMEGYKVVTMEEAAPHADIFVTATGNYHVITREHMQAMKDQAIVCNIGHFDNEIDVAALDDCQWEE---IKPQVDHVVFPD-GKRIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELY 412          

HSP 2 Score: 38.1206 bits (87), Expect = 1.751e-75
Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = -2
Query:  624 RGPRYTK*R-ERLVGVSEETTTGVKRLYQMQENGTLLF 734
            R P++   R  ++ GV+EETTTGV RLYQM + G L F
Sbjct:  179 RDPKWYSTRLAQIRGVTEETTTGVHRLYQMAQKGELAF 216          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_FLAPJ (Adenosylhomocysteinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ahcY PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.752e-75
Identity = 129/204 (63.24%), Postives = 156/204 (76.47%), Query Frame = -3
Query:   11 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKS 622
            PAINVNDSVTKSKFDN YGC+ S  D + RATD+M+AGK  VVCGYGDVGKG AA+ + AG+ V VTEIDPICALQA M+G +V  L  V+ +ADI +TTTGNKDI++  H ++MK+  IVCNIGHFDNEID+  L    G  +I IKPQ D++        I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK  +
Sbjct:  182 PAINVNDSVTKSKFDNKYGCKESAVDAVRRATDIMLAGKRVVVCGYGDVGKGTAASFRGAGSIVTVTEIDPICALQAAMDGFEVKKLNTVVGNADIIITTTGNKDIVLGSHFEQMKDKTIVCNIGHFDNEIDMAWLNKNHGASKIEIKPQVDKYTI--AGKDILILAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWKNSA 383          

HSP 2 Score: 36.965 bits (84), Expect = 1.752e-75
Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = -2
Query:  621 RYTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 725
            RY    E + G+SEETTTGV RLY+  + GTL  P
Sbjct:  148 RYPHLVEGIKGLSEETTTGVHRLYERVKAGTLPMP 182          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 1.752e-75
Identity = 138/200 (69.00%), Postives = 162/200 (81.00%), Query Frame = -3
Query:   23 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 622
            PAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+  GARVI+TEIDPI ALQA MEG +V T+++   + +IFVTTTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR++  +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW
Sbjct:  176 PAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCTDIILGQHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRYLL-KNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELW 373          

HSP 2 Score: 33.8834 bits (76), Expect = 1.752e-75
Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = -2
Query:  621 GVSEETTTGVKRLYQMQENGTLLFP 695
            G+SEETTTGV  LY+M   G L  P
Sbjct:  152 GISEETTTGVHNLYKMMAKGILKVP 176          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 266.544 bits (680), Expect = 1.752e-75
Identity = 138/200 (69.00%), Postives = 162/200 (81.00%), Query Frame = -3
Query:   23 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 622
            PAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+  GARVI+TEIDPI ALQA MEG +V T+++   + +IFVTTTG  DII+  H ++MK++AIVCNIGHFD EIDV  L     V+++ IKPQ DR+ + +    II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW
Sbjct:  176 PAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNE-NAVEKVNIKPQVDRY-WLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELW 373          

HSP 2 Score: 36.5798 bits (83), Expect = 1.752e-75
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = -2
Query:  621 GVSEETTTGVKRLYQMQENGTLLFP 695
            G+SEETTTGV  LY+M  NG L  P
Sbjct:  152 GISEETTTGVHNLYKMMSNGILKVP 176          
The following BLAST results are available for this feature:
BLAST of GE213340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_RHOBA4.641e-7664.02Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_DIAST6.050e-7669.15Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_PIG7.897e-7669.00Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]
SAHH_RAT1.030e-7569.00Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHHA_XENLA1.343e-7568.00Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy... [more]
SAHH_LEPCP1.751e-7569.15Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_BORPD1.751e-7568.16Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_FLAPJ1.752e-7563.24Adenosylhomocysteinase OS=Flavobacterium psychroph... [more]
SAHH_BOVIN1.752e-7569.00Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHH_MOUSE1.752e-7569.00Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]

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Properties
Property NameValue
Genbank description201 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.