GE213340

Overview
NameGE213340
Unique NameGE213340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_SULTO (Adenosylhomocysteinase OS=Sulfolobus tokodaii GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.396e-44
Identity = 98/217 (45.16%), Postives = 138/217 (63.59%), Query Frame = -3
Query:   14 IRCKKMEPSC---FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK 655
            IR K ME      +P I VN++ TK  FDN  G   S  DG++RAT+++IAGKVAVV GYG VG+G A  L+  GARVIV E+ P+ AL+A+M+G  V+ +       +IF+T TGN ++I  +H+ KMK+ AI+ N GHF+ EIDV GL+      R+ I+P  + +  P     I +LAEGRL+NL  A GHPS VM  SF+NQ ++   +++ +
Sbjct:  153 IRLKAMEEQGVLRYPVIAVNNAFTKYLFDNRIGTGQSTIDGILRATNILIAGKVAVVAGYGWVGRGIAQRLRGMGARVIVVEVSPLRALEAVMDGFDVMPMSKAAELGEIFITATGNINVIRKEHILKMKDGAILANSGHFNVEIDVKGLKEMAKSSRL-IRPNLEEYELP-NGKRIYLLAEGRLVNLAAAEGHPSEVMDLSFSNQALSVKYIYENR 367          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_METMA (Adenosylhomocysteinase OS=Methanosarcina mazei GN=ahcY PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.185e-42
Identity = 89/194 (45.88%), Postives = 120/194 (61.86%), Query Frame = -3
Query:   41 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 622
            P I VND++TK  FDN YG   S  DG+ R T++++AGK  VV GYG  G+G A      GA VIVTEIDPI AL+A M+G +V+ + +     D+FVT TGN+DI+  D+ K MK+ AI+ N GHF+ EID+  L++     R T++       +   N  I V+AEGRL+NL    GHP+ VM  SF NQ +
Sbjct:  166 PVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLLVAGKNVVVAGYGWCGRGVAMRATGLGASVIVTEIDPIRALEARMDGHRVMKMSEAAKIGDLFVTATGNRDILTADNFKVMKDGAILANSGHFNVEIDMEALDSLAKSTR-TVRHNIKE--YDIGNRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQAL 356          

HSP 2 Score: 33.4982 bits (75), Expect = 1.185e-42
Identity = 14/28 (50.00%), Postives = 21/28 (75.00%), Query Frame = -2
Query:  621 RLVGVSEETTTGVKRLYQMQENGTLLFP 704
            +++G  EETTTGV RL+ M+++G L  P
Sbjct:  139 KILGGCEETTTGVHRLHAMEKDGALKMP 166          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_SULAC (Adenosylhomocysteinase OS=Sulfolobus acidocaldarius GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.687e-42
Identity = 102/221 (46.15%), Postives = 134/221 (60.63%), Query Frame = -3
Query:   14 IRCKKMEPSC---FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPE----TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEK 655
            IR K ME      +P I VN++ TK  FDN  G   S  DG++RAT+++IAGKVAVV GYG VG+G A+  K  GARVIV E  P  AL+ALM+G  V+T+       DIFVT TGN +++  DH+ +MK+ A++ N GHF+ EIDV GL      K I+++ +  R    E        I +LA+GRL+NL  A GHPS VM  SF NQ ++   L K K
Sbjct:  153 IRLKAMEEEKVLKYPVIAVNNAFTKYLFDNRIGTGQSTIDGILRATNILIAGKVAVVIGYGWVGRGIASRFKGMGARVIVVESSPFRALEALMDGFDVMTMNRASEIGDIFVTATGNLNVVSRDHILRMKDGAVLANSGHFNVEIDVKGL------KEISVETREVRQNLEEYKLRNGKRIYLLADGRLVNLVAAEGHPSEVMDLSFCNQALSVEHLIKNK 367          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_METAC (Adenosylhomocysteinase OS=Methanosarcina acetivorans GN=ahcY PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.850e-42
Identity = 89/197 (45.18%), Postives = 120/197 (60.91%), Query Frame = -3
Query:   41 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSG---IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 622
            P I VND++TK  FDN YG   S  DG+ R T++++AGK  VV GYG  G+G A      GA VIVTE+DPI AL+A M+G +V+ + D     +IFVTTTGN+DI+  +H K M + A++ N GHF+ EID+  L +      +    +T R    E + G   I V+AEGRL+NL    GHP+ VM  SF NQ +
Sbjct:  166 PVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLLVAGKNVVVGGYGWCGRGVAMRAAGLGANVIVTEVDPIRALEARMDGYRVMRMADAARLGEIFVTTTGNRDILTAEHFKVMPDGAVLANSGHFNVEIDMEALTS------LAKSVKTVRHNIKEYDIGDRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQAL 356          

HSP 2 Score: 33.113 bits (74), Expect = 9.850e-42
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2
Query:  621 RLVGVSEETTTGVKRLYQMQENGTLLFP 704
            +++G  EETTTGV RL+ M++ G L  P
Sbjct:  139 KILGGCEETTTGVHRLHAMEKEGALKMP 166          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_THEMA (Adenosylhomocysteinase OS=Thermotoga maritima GN=ahcY PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 2.840e-41
Identity = 81/199 (40.70%), Postives = 118/199 (59.30%), Query Frame = -3
Query:   26 PAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLEL 622
            P I VNDS  K  FDN YG   S  D +MR T++++AGK  VV GYG  G+G A      GARVIVTE+DP+ A++A+M+G  V+ +++ +  AD  +T +GN D++  + +  +K+ A++ N GHF+ EI V  LE    V++   +P    +   E    + +LAEGRL+NL    GHP  +M  SF  Q+ A L L
Sbjct:  159 PVIAVNDSKMKYLFDNRYGTGQSTWDAIMRNTNLLVAGKNVVVAGYGWCGRGIALRAAGLGARVIVTEVDPVKAVEAIMDGFTVMPMKEAVKIADFVITASGNTDVLSKEDILSLKDGAVLANAGHFNVEIPVRVLEEI-AVEKFEARPNVTGYTL-ENGKTVFLLAEGRLVNLAAGDGHPVEIMDLSFALQIFAVLYL 355          

HSP 2 Score: 37.7354 bits (86), Expect = 2.840e-41
Identity = 18/29 (62.07%), Postives = 21/29 (72.41%), Query Frame = -2
Query:  621 ERLVGVSEETTTGVKRLYQMQENGTLLFP 707
            E L GVSEETTTGV+RL  ++E G L  P
Sbjct:  131 ENLKGVSEETTTGVRRLKALEETGKLRVP 159          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.699e-41
Identity = 87/208 (41.83%), Postives = 124/208 (59.62%), Query Frame = -3
Query:   14 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT--IKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEK 625
            FP + VND+ TK  FDN YG   S  D +M  T+++IAGK  VVCGYG  G+G A   +  GA VIVTE+DPI AL+A M+G +V+ + D + +ADI +T TGN D++       MK+  ++ N GHF+ EI+   LE    + R T  +K   + ++ P+    I +LAEGRL+NL      GHP+ +M  SF  Q ++   L +EK
Sbjct:  168 FPVMAVNDAYTKYLFDNRYGTGQSTFDSIMGTTNMLIAGKTVVVCGYGWCGRGIAMRAEGLGASVIVTEVDPIRALEARMDGFRVMKVSDAVKEADILITATGNTDVVSESEFMNMKDGCVMANSGHFNVEINREALEE---LSRETGKVKEDIEVFIMPDGRK-IYLLAEGRLVNLASERGQGHPAEIMDMSFAMQALSARHLLQEK 371          

HSP 2 Score: 33.4982 bits (75), Expect = 3.699e-41
Identity = 14/27 (51.85%), Postives = 18/27 (66.67%), Query Frame = -2
Query:  621 LVGVSEETTTGVKRLYQMQENGTLLFP 701
            ++G  EETTTG+ RL  M  +G L FP
Sbjct:  143 IIGACEETTTGINRLRAMAADGALKFP 169          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAB (Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahcY PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 7.349e-39
Identity = 87/196 (44.39%), Postives = 116/196 (59.18%), Query Frame = -3
Query:   38 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 625
            FP I VNDS  K  FDN YG   S  DG+MRAT++++AGK  VV GYG  G+G A   +  GA VIV E+DPI AL+A M+G  V+++++     DIFVT TGN   I  +H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A
Sbjct:  173 FPVIAVNDSYMKYLFDNRYGTGQSTWDGIMRATNLLVAGKNVVVVGYGWCGRGIAMRARGLGATVIVVEVDPIKALEARMDGFLVMSMKEAAKIGDIFVTATGNIKCIRREHFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKD-GRRLYLLADGRLVNLVAADGHPAEIMDMSFALQAKA 366          

HSP 2 Score: 31.5722 bits (70), Expect = 7.349e-39
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = -2
Query:  621 ERLVGVSEETTTGVKRLYQMQENGTLLFP 707
            + + G SEETTTGV RL  M+ +  L FP
Sbjct:  146 DEIWGASEETTTGVIRLRAMERDKVLRFP 174          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_THEVO (Adenosylhomocysteinase OS=Thermoplasma volcanium GN=ahcY PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 87/208 (41.83%), Postives = 123/208 (59.13%), Query Frame = -3
Query:   41 IRCKKMEPS---CFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 655
            +R K ME +    FP  +VND+  K  FDN YG   S  DG+M +T+++IAG+  VV GYG  G+G A  LK  GA VIVTEIDPI A +A+M+G QV  + D +  AD+ +T TG KD++  +     K N ++ N GHFDNE+ V  +E +   KR  ++    R+   E  + + V+A+GRL+NL    GHP  +M  SF  Q +
Sbjct:  148 VRLKAMEKAGVLLFPMFDVNDANMKHLFDNRYGTGQSTLDGIMNSTNLLIAGRNVVVAGYGYCGRGIAMRLKGMGANVIVTEIDPIKANEAIMDGFQVRRMNDAIRYADMVITATGMKDVVKYEDALVAKKNIVLANAGHFDNEVAVKEIEKHSLEKR-EVREFVKRYRL-ENGNTVDVIADGRLVNLAAGQGHPVEIMDLSFALQAL 353          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_PYRHO (Adenosylhomocysteinase OS=Pyrococcus horikoshii GN=ahcY PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 6.590e-37
Identity = 85/196 (43.37%), Postives = 114/196 (58.16%), Query Frame = -3
Query:   38 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 625
            F  I VNDS  K  FDN YG   S  DG+MRAT+++IAGK  VV GYG  G+G A   +  GA VIV E+DPI AL+A M+G  V+ +++     DIF+T TG+   I  +H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A
Sbjct:  172 FSVIAVNDSYMKYLFDNRYGTGQSTWDGVMRATNLLIAGKNVVVVGYGWCGRGIAMRARGLGATVIVVEVDPIKALEARMDGFLVMNMKEAAKIGDIFITATGDIKCIRREHFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKD-GRRLYLLADGRLVNLVAADGHPAEIMDMSFALQAKA 365          

HSP 2 Score: 30.8018 bits (68), Expect = 6.590e-37
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = -2
Query:  624 ERLVGVSEETTTGVKRLYQMQENGTLLF 707
            + + G SEETTTGV RL  M+ +G L F
Sbjct:  145 DEIWGGSEETTTGVIRLRAMERDGVLRF 172          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_THEAC (Adenosylhomocysteinase OS=Thermoplasma acidophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.909e-36
Identity = 84/207 (40.58%), Postives = 122/207 (58.94%), Query Frame = -3
Query:   41 RCKKMEPS---CFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 652
            R + ME S    FP  +VND+  K  FDN YG   S  DG+M AT+++IAG+  VV GYG  G+G A  LK  GA VIVTEIDPI A +A+M+G QV  + + + DAD+ +T TG KD++  +     K N ++ N GHF+NE+ V  +E    ++   ++    R+   E  + + ++A+GRL+NL    GHP  +M  SF  Q +
Sbjct:  149 RLRAMERSGVLLFPMFDVNDANMKHLFDNRYGTGQSTLDGIMNATNLLIAGRTVVVAGYGYCGRGIAMRLKGMGANVIVTEIDPIKANEAIMDGFQVRRMNNAIRDADMVITATGMKDVVKYEDALVAKKNIVLANAGHFNNEVAVSEIEK-RSLEVNEVREFVKRYRL-ENGNTVDIIADGRLVNLAAGQGHPVEIMDLSFALQAL 353          
The following BLAST results are available for this feature:
BLAST of GE213340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_SULTO6.396e-4445.16Adenosylhomocysteinase OS=Sulfolobus tokodaii GN=a... [more]
SAHH_METMA1.185e-4245.88Adenosylhomocysteinase OS=Methanosarcina mazei GN=... [more]
SAHH_SULAC2.687e-4246.15Adenosylhomocysteinase OS=Sulfolobus acidocaldariu... [more]
SAHH_METAC9.850e-4245.18Adenosylhomocysteinase OS=Methanosarcina acetivora... [more]
SAHH_THEMA2.840e-4140.70Adenosylhomocysteinase OS=Thermotoga maritima GN=a... [more]
SAHH_METTH3.699e-4141.83Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_PYRAB7.349e-3944.39Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahc... [more]
SAHH_THEVO2.603e-3741.83Adenosylhomocysteinase OS=Thermoplasma volcanium G... [more]
SAHH_PYRHO6.590e-3743.37Adenosylhomocysteinase OS=Pyrococcus horikoshii GN... [more]
SAHH_THEAC4.909e-3640.58Adenosylhomocysteinase OS=Thermoplasma acidophilum... [more]

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Properties
Property NameValue
Genbank description201 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.