GE213340

Overview
NameGE213340
Unique NameGE213340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RHIL3 (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ahcY PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 3.259e-80
Identity = 140/201 (69.65%), Postives = 163/201 (81.09%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG AA+L  AGARV VTE DPICALQA M+G +V+ LEDV+S ADIF+TTTGNKD+I +DHM+ MK+ AIV NIGHFDNEI+V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+
Sbjct:  211 FPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEADPICALQAAMDGYEVVLLEDVVSSADIFITTTGNKDVIRIDHMRAMKDMAIVGNIGHFDNEIEVAALR---NLKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELF 407          

HSP 2 Score: 45.0542 bits (105), Expect = 3.259e-80
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = -2
Query:  621 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 722
            +TK R+ + GV+EETTTGV RLYQ+ + G L FP
Sbjct:  179 FTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFP 212          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.259e-80
Identity = 140/201 (69.65%), Postives = 167/201 (83.08%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDN YGC+ SL DG+ RATDVM+AGKVAVVCGYGDVGKG AA+L+ AGARV VTE+DPICALQA M+G +V+ LEDV++DADIF+TTTGNKD+I ++HM++MK+ AIV NIGHFDNEI V  L+ +   K   IK Q D    P + + II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW
Sbjct:  208 FPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDVMMAGKVAVVCGYGDVGKGSAASLRGAGARVKVTEVDPICALQAAMDGFEVVVLEDVVADADIFITTTGNKDVIRIEHMREMKDMAIVGNIGHFDNEIQVAALKNH---KWTNIKDQVDMIEMP-SGARIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELW 404          

HSP 2 Score: 40.817 bits (94), Expect = 3.259e-80
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = -2
Query:  621 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 722
            +T+ R  + GVSEETTTGV RLY + + G L FP
Sbjct:  176 FTQQRAAIKGVSEETTTGVHRLYDLHKKGLLPFP 209          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_SINMW (Adenosylhomocysteinase OS=Sinorhizobium medicae (strain WSM419) GN=ahcY PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 4.250e-80
Identity = 139/201 (69.15%), Postives = 164/201 (81.59%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG AA+L  AGARV VTE+DPICALQA M+G +V+ LEDV+S ADIF+TTTGNKD+I ++HM+ MK+ AIV NIGHFDNEI V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SF+NQV+AQ+EL+
Sbjct:  211 FPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALR---NLKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELF 407          

HSP 2 Score: 45.8246 bits (107), Expect = 4.250e-80
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = -2
Query:  621 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 722
            +TK R+ + GV+EETTTGV RLYQ+Q  G L FP
Sbjct:  179 FTKQRDAIKGVTEETTTGVNRLYQLQAKGLLPFP 212          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 9.428e-80
Identity = 139/201 (69.15%), Postives = 160/201 (79.60%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDN YG RHSL DG+ R TDV+I GK  ++CGYGDVGKGCA +L   GARV VTEIDPI ALQALM+G  V+T+E  + +ADI +T TGNKDII +DHMK MK+ AI+ NIGHFDNEID+  LE   G  R+TIKPQ D W F E+   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW
Sbjct:  236 FPAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDVLIGGKKVLICGYGDVGKGCAESLAGQGARVQVTEIDPINALQALMDGYDVVTVEQAIGEADIVITATGNKDIITLDHMKAMKDQAILGNIGHFDNEIDMAALER-SGATRLTIKPQVDLWTFGESGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELW 435          

HSP 2 Score: 38.891 bits (89), Expect = 9.428e-80
Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = -2
Query:  621 RYTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 725
            ++T   E + GV+EETTTGV RLYQ    G L+FP
Sbjct:  203 KWTAIAESVRGVTEETTTGVLRLYQFAAAGELVFP 237          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 9.431e-80
Identity = 138/208 (66.35%), Postives = 166/208 (79.81%), Query Frame = -3
Query:    2 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 625
            +PAINVNDSVTKSKFDNLYGCR SL DG+ R TDVM++GKVA+V G+GDVGKG AA+L+QAGARV+V+E+DPICALQA MEG QV+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+     GK
Sbjct:  214 WPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMMSGKVAMVAGFGDVGKGSAASLRQAGARVMVSEVDPICALQAAMEGYQVVTMEDAAPIADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLK---NLKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFANNKDGK 417          

HSP 2 Score: 43.1282 bits (100), Expect = 9.431e-80
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = -2
Query:  621 GVSEETTTGVKRLYQMQENGTLLFP 695
            GVSEETTTGV RLY MQ+ GTLL+P
Sbjct:  191 GVSEETTTGVHRLYDMQKAGTLLWP 215          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 9.431e-80
Identity = 139/201 (69.15%), Postives = 164/201 (81.59%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG AA+L  AGARV VTE+DPICALQA M+G +V+ LEDV+S ADIF+TTTGNKD+I ++HM+ MK+ AIV NIGHFDNEI V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SF+NQV+AQ+EL+
Sbjct:  211 FPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALR---NLKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELF 407          

HSP 2 Score: 44.669 bits (104), Expect = 9.431e-80
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = -2
Query:  621 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 722
            +T+ R+ + GV+EETTTGV RLYQ+Q  G L FP
Sbjct:  179 FTRQRDAIKGVTEETTTGVNRLYQLQAKGLLPFP 212          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 1.230e-79
Identity = 137/208 (65.87%), Postives = 165/208 (79.33%), Query Frame = -3
Query:    2 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 625
            +PAINVNDSVTKSKFDNLYGCR SL DG+ R TDVM++GKVA+V G+GDVGKG AA+L+QAG RV+V+E+DPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI + GL     +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GK
Sbjct:  216 WPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMMSGKVAMVAGFGDVGKGSAASLRQAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAGLR---NLKWTNIKPQVDEIEFPDKHR-IIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGK 419          

HSP 2 Score: 43.1282 bits (100), Expect = 1.230e-79
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = -2
Query:  621 GVSEETTTGVKRLYQMQENGTLLFP 695
            GVSEETTTGV RLY MQ+ GTLL+P
Sbjct:  193 GVSEETTTGVHRLYDMQKAGTLLWP 217          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.604e-79
Identity = 138/201 (68.66%), Postives = 162/201 (80.60%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDNLYGCR SL DG+ R TDVM+AGKVA+V G+GDVGKG AA+L+ AG RV+V+E+DPICALQA MEG +V T+ED    ADIFVT TGNKD+I +DHM+ MK+ AIVCNIGHFDNEI V GL+    +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW
Sbjct:  213 FPAINVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVMVSEVDPICALQAAMEGYEVTTMEDAAPRADIFVTATGNKDVITIDHMRSMKDRAIVCNIGHFDNEIQVAGLK---NLKWSNIKPQVDEIEFPDGHR-IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELW 409          

HSP 2 Score: 40.4318 bits (93), Expect = 1.604e-79
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = -2
Query:  621 ERLVGVSEETTTGVKRLYQMQENGTLLFP 707
            E + GVSEETTTGV RLY + + G LLFP
Sbjct:  186 ESIKGVSEETTTGVHRLYILAKEGKLLFP 214          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.605e-79
Identity = 139/201 (69.15%), Postives = 163/201 (81.09%), Query Frame = -3
Query:   23 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 625
            FPAINVNDSVTKSKFDN YGC+ SL DG+ RATDVM+AGKVAVVCGYGDVGKG AA+L  AGARV VTE+DPICALQA M+G +V+ LEDV+S ADIF++TTGNKD+I +DHM+ MK+ AIV NIGHFDNEI V  L     +K   +KPQ D   F + N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+
Sbjct:  211 FPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVLLEDVVSSADIFISTTGNKDVIRIDHMRAMKDMAIVGNIGHFDNEIQVAALR---NLKWTNVKPQVDLIEFAKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELF 407          

HSP 2 Score: 45.0542 bits (105), Expect = 1.605e-79
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = -2
Query:  621 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 722
            +TK R+ + GV+EETTTGV RLYQ+ + G L FP
Sbjct:  179 FTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFP 212          
BLAST of GE213340 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 2.093e-79
Identity = 140/207 (67.63%), Postives = 159/207 (76.81%), Query Frame = -3
Query:    5 FPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG 625
            FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKG A AL+   A+V VTEIDPICALQA MEG +V+T++      DIFVT TGN  +I  DHM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E   G
Sbjct:  215 FPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEE---IKPQVDHVIFPD-GKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKG 417          

HSP 2 Score: 41.9726 bits (97), Expect = 2.093e-79
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = -2
Query:  621 YTK*RERLVGVSEETTTGVKRLYQMQENGTLLFP 722
            Y++  + + GV+EETTTGV RLYQM + G L FP
Sbjct:  183 YSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFP 216          
The following BLAST results are available for this feature:
BLAST of GE213340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_RHIL33.259e-8069.65Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_RHOCA3.259e-8069.65Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_SINMW4.250e-8069.15Adenosylhomocysteinase OS=Sinorhizobium medicae (s... [more]
SAHH_NOCFA9.428e-8069.15Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_RHOPS9.431e-8066.35Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHIME9.431e-8069.15Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_BRAJA1.230e-7965.87Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_METS41.604e-7968.66Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_AGRRK1.605e-7969.15Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_RALSO2.093e-7967.63Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]

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Properties
Property NameValue
Genbank description201 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.