GE213291

Overview
NameGE213291
Unique NameGE213291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.888e-53
Identity = 97/167 (58.08%), Postives = 124/167 (74.25%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 529
            +Q+FR LAY+H+   VCHRD+KPQNLLVD  T  +K+CDFGSAK L+  E N+SYICSR+YRAPEL+FGAT YTT ID+WSA CV+AEL +G+PLFPG+++V+QLVEII+VLGTP+  EI  MNPNY +   P ++ H    V        A+DL  ++L Y PS R
Sbjct:  132 FQLFRALAYLHSTG-VCHRDIKPQNLLVDYKTGILKLCDFGSAKVLVPSEPNVSYICSRYYRAPELVFGATHYTTKIDVWSAACVIAELFIGRPLFPGDSSVEQLVEIIRVLGTPSYHEISVMNPNYVNHSLPNVRPHTLESVMPHNCTKNAMDLLHKMLTYVPSKR 297          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.703e-39
Identity = 84/171 (49.12%), Postives = 108/171 (63.16%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD--FRFPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLR 529
            YQI RG+ Y+H +  VCHRD+KP N+LVDP T  +KICDFGSAK+L   + +ISYICSRFYRAPELI G T+YTT IDIW  GCV+ E+L+G+ +F G+  + QL EI K+LG P +  I   NP Y    F  P        +   +     P+ IDL  ++L Y P  R
Sbjct:  146 YQIARGMLYLHGLG-VCHRDIKPSNVLVDPETGVLKICDFGSAKKLEHNQPSISYICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEMLIGKAIFQGQEPLLQLREIAKLLGPPDKRFIFFSNPAYDGPLFSKPLFSGSSQQRFEKYFGHSGPDGIDLLMKILVYEPQQR 315          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: GLKA_DICDI (Probable serine/threonine-protein kinase glkA OS=Dictyostelium discoideum GN=glkA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.963e-34
Identity = 72/170 (42.35%), Postives = 110/170 (64.71%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQ+ + + +IH+   +CHRD+ P N+L+     ++ + DFGSAK L +   ++SYICSR+YRAPEL+ G + YTT IDIWS GC+LAE+L+G+PLFPG N+ DQL  II+VLG+PT++++  M P+     + P I    + +  H       +DL S++  + P  R +
Sbjct:  190 YQLCQAIKHIHS-KAICHRDITPNNILLSS-KGELTLADFGSAKILESNHTSMSYICSRYYRAPELLVGCSNYTTKIDIWSIGCILAEMLIGKPLFPGTNSNDQLGRIIEVLGSPTKDDMEAMKPSKPYHLQLPNINP-KFFESLHNVEDKTVVDLLSKIFIFDPVKRAS 356          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.135e-32
Identity = 74/175 (42.29%), Postives = 110/175 (62.86%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANIS----YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 529
            YQI RGL YIH+   V HRDLKP NLL++  T  +KICDFG A+       +      Y+ +R+YRAPE++  +  YT SIDIWS GC+LAE+L  +P+FPG++ +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F     P+A+DL  ++L ++P  R
Sbjct:  134 YQILRGLKYIHSA-NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADPKALDLLDKMLTFNPHKR 304          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.347e-32
Identity = 74/172 (43.02%), Postives = 104/172 (60.47%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQ+ RGL Y+H+   V HRDLKP NLL++     +KICDFG A+     +    Y+ +R+YRAPEL+   TEYT +IDIWS GC+L EL+  +PLFPG +   QL  II +LG+P   +   +R  N        P++  HP+ + F   + P A+DLA R+L + P+ R T
Sbjct:  146 YQLLRGLKYVHSA-NVLHRDLKPSNLLLNA-NCDLKICDFGLARTTSEADFMTEYVVTRWYRAPELLLNCTEYTAAIDIWSVGCILMELIKREPLFPGRDYAQQLGLIIALLGSPEDSDLGFLRSDNARKYVKHLPRVPRHPFSQKF-PDVSPLALDLAERMLVFDPAKRIT 314          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MK03_RAT (Mitogen-activated protein kinase 3 OS=Rattus norvegicus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 137.117 bits (344), Expect = 5.347e-32
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQI RGL YIH+   V HRDLKP NLL++  T  +KICDFG A+  IA   +        Y+ +R+YRAPE++  +  YT SIDIWS GC+LAE+L  +P+FPG++ +DQL  I+ +LG+P++E++ C+      NY     P      W K+F K    +A+DL  R+L ++P+ R T
Sbjct:  149 YQILRGLKYIHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLAR--IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRIT 321          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MK03_MOUSE (Mitogen-activated protein kinase 3 OS=Mus musculus GN=Mapk3 PE=1 SV=5)

HSP 1 Score: 137.117 bits (344), Expect = 5.347e-32
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQI RGL YIH+   V HRDLKP NLL++  T  +KICDFG A+  IA   +        Y+ +R+YRAPE++  +  YT SIDIWS GC+LAE+L  +P+FPG++ +DQL  I+ +LG+P++E++ C+      NY     P      W K+F K    +A+DL  R+L ++P+ R T
Sbjct:  149 YQILRGLKYIHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLAR--IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRIT 321          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MK03_HUMAN (Mitogen-activated protein kinase 3 OS=Homo sapiens GN=MAPK3 PE=1 SV=4)

HSP 1 Score: 137.117 bits (344), Expect = 5.347e-32
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEAN------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQI RGL YIH+   V HRDLKP NLL++  T  +KICDFG A+  IA   +        Y+ +R+YRAPE++  +  YT SIDIWS GC+LAE+L  +P+FPG++ +DQL  I+ +LG+P++E++ C+      NY     P      W K+F K    +A+DL  R+L ++P+ R T
Sbjct:  148 YQILRGLKYIHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLAR--IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRIT 320          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.191e-31
Identity = 70/169 (41.42%), Postives = 104/169 (61.54%), Query Frame = -1
Query:   29 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK--RMPPEAIDLASRLLQYSPSLR 529
            YQI RGL YIH+   V HRDLKP NLL+      +KICDFG A+          Y+ +R+YRAPEL+ G+++YT +ID+WS GC+  E++  +PLFPG++ V+QL  +++++GTP+ EE+  ++  Y      Q+   P      K   +PP AIDL  ++L + P  R
Sbjct:  168 YQILRGLKYIHSA-NVLHRDLKPSNLLLSTQC-DLKICDFGLARATPESNLMTEYVVTRWYRAPELLLGSSDYTAAIDVWSVGCIFMEIMNREPLFPGKDQVNQLRLLLELIGTPSEEELGSLS-EYAKRYIRQLPTLPRQSFTEKFPNVPPLAIDLVEKMLTFDPKQR 333          
BLAST of GE213291 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.556e-31
Identity = 71/175 (40.57%), Postives = 111/175 (63.43%), Query Frame = -1
Query:   23 YQIFRGLAYIHTVPRVCHRDLKPQNLLVDPLTHQVKICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFR--FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 529
            YQI  G+AY H+  RV HRDLKPQNLL+D  T+ +K+ DFG A+         ++ + + +YRAPE++ GA +Y+T +D+WS GC+ AE++  +PLFPG++ +D+L +I ++LGTP  +    + C+     DF+  FP+ +A     V    + P  +DL S++L+Y PS R T
Sbjct:  109 YQILHGVAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCL----PDFKTAFPRWQAQDLATVV-PNLDPAGLDLLSKMLRYEPSKRIT 277          
The following BLAST results are available for this feature:
BLAST of GE213291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSK31_SCHPO1.888e-5358.08Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]
MCK1_YEAST7.703e-3949.12Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
GLKA_DICDI1.963e-3442.35Probable serine/threonine-protein kinase glkA OS=D... [more]
MK01_XENLA3.135e-3242.29Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]
NTF6_TOBAC5.347e-3243.02Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MK03_RAT5.347e-3243.58Mitogen-activated protein kinase 3 OS=Rattus norve... [more]
MK03_MOUSE5.347e-3243.58Mitogen-activated protein kinase 3 OS=Mus musculus... [more]
MK03_HUMAN5.347e-3243.58Mitogen-activated protein kinase 3 OS=Homo sapiens... [more]
MPK10_ARATH1.191e-3141.42Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
CDC2_MAIZE1.556e-3140.57Cell division control protein 2 homolog OS=Zea may... [more]

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Properties
Property NameValue
Genbank description145 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.